Detailed information NTG0792060

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PVZ94_RS16735
• Genome accession: NZ_CP118348
• Coordinates: 3462929..3464038 (+)
• Length: 369 a.a.
• NCBI ID: WP_010931495.1
• Uniprot ID: -
• Organism: Bordetella pertussis strain SA14
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3457929..3469038

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PVZ94_RS16710 (PVZ94_16730)	-	3459812..3460198 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
PVZ94_RS16715 (PVZ94_16735)	-	3460206..3461339 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
PVZ94_RS16720 (PVZ94_16740)	-	3461403..3461654 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PVZ94_RS16725 (PVZ94_16745)	coaD	3461709..3462218 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
PVZ94_RS16730 (PVZ94_16750)	rsmD	3462239..3462859 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PVZ94_RS16735 (PVZ94_16755)	pilA	3462929..3464038 (+)	1110	WP_010931495.1	signal recognition particle-docking protein FtsY	Machinery gene
PVZ94_RS16740 (PVZ94_16760)	-	3464085..3465683 (-)	1599	Protein_3286	CYTH and CHAD domain-containing protein	-
PVZ94_RS16745 (PVZ94_16770)	phnE	3465868..3466689 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
PVZ94_RS16750 (PVZ94_16775)	phnE	3466686..3467555 (-)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
PVZ94_RS16755 (PVZ94_16780)	-	3467573..3468058 (-)	486	Protein_3289	phosphonate ABC transporter ATP-binding protein	-
PVZ94_RS16760 (PVZ94_16785)	-	3468052..3469002 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 38727.33 Da
• Isoelectric Point: 6.5148

>NTDB_id=792060 PVZ94_RS16735 WP_010931495.1 3462929..3464038(+) (pilA) [Bordetella pertussis strain SA14]
MPMFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSR
TGQNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLG
RAQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNA
GRARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDG
TAKGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1110 bp

>NTDB_id=792060 PVZ94_RS16735 WP_010931495.1 3462929..3464038(+) (pilA) [Bordetella pertussis strain SA14]
TTGCCCATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGT
GGACGCAGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGC
CGCAGCCACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGC
ACCGGCCAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGAT
CATGGCCGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACG
ATCCGGCGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGG
CGGGCCCAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATAC
CTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAAT
GGGGCAGCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCC
GGACGTGCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATT
GAAGAAGATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCG
GCCAGAACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGC
ACCGCCAAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGT
GGGCGAGGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (165-367)

• SRP54-type protein, helical bundle domain (SRP54_N) (85-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	93.496	0.504