Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   PVK53_RS09685 Genome accession   NZ_CP118308
Coordinates   1925094..1925870 (+) Length   258 a.a.
NCBI ID   WP_032461591.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 20203206     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1920094..1930870
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PVK53_RS09665 (PVK53_09615) - 1921921..1922695 (-) 775 Protein_1844 IS30 family transposase -
  PVK53_RS09675 (PVK53_09625) rlmH 1923091..1923570 (-) 480 WP_002991465.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PVK53_RS09680 (PVK53_09630) htrA 1923782..1925005 (+) 1224 WP_002991468.1 S1C family serine protease Regulator
  PVK53_RS09685 (PVK53_09635) spo0J 1925094..1925870 (+) 777 WP_032461591.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29072.87 Da        Isoelectric Point: 10.3100

>NTDB_id=791606 PVK53_RS09685 WP_032461591.1 1925094..1925870(+) (spo0J) [Streptococcus pyogenes strain 20203206]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKTIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=791606 PVK53_RS09685 WP_032461591.1 1925094..1925870(+) (spo0J) [Streptococcus pyogenes strain 20203206]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAACACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAACAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-197)

ParB/Sulfiredoxin domain (ParB_N)

(9-96)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.366

99.612

0.581