Detailed information NTG0791567

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: Q7622_RS09320
• Genome accession: NZ_CP131711
• Coordinates: 1824699..1825598 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904848.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 2014C08-275
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1819699..1830598

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7622_RS09300 (Q7622_09270)	rsmA	1820349..1821221 (-)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
Q7622_RS09305 (Q7622_09275)	-	1821472..1821765 (-)	294	Protein_1820	hypothetical protein	-
Q7622_RS09310 (Q7622_09280)	-	1821758..1822399 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
Q7622_RS09315 (Q7622_09285)	-	1822401..1824431 (-)	2031	WP_000825271.1	bacteriocin-associated integral membrane family protein	-
Q7622_RS09320 (Q7622_09290)	comR	1824699..1825598 (-)	900	WP_000904848.1	helix-turn-helix transcriptional regulator	Regulator
Q7622_RS09325 (Q7622_09295)	rnmV	1825670..1826230 (-)	561	WP_000660013.1	ribonuclease M5	-
Q7622_RS09330 (Q7622_09300)	-	1826230..1827003 (-)	774	WP_000575650.1	TatD family hydrolase	-
Q7622_RS09335 (Q7622_09305)	-	1827308..1828201 (-)	894	WP_001816585.1	DUF1542 domain-containing protein	-
Q7622_RS09340 (Q7622_09310)	rpmH	1828485..1828619 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
Q7622_RS09345 (Q7622_09315)	-	1828764..1829978 (-)	1215	WP_000666484.1	pyridoxal phosphate-dependent aminotransferase	-
Q7622_RS09350 (Q7622_09320)	-	1830134..1830426 (-)	293	Protein_1829	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35420.14 Da
• Isoelectric Point: 4.6674

>NTDB_id=791567 Q7622_RS09320 WP_000904848.1 1824699..1825598(-) (comR) [Streptococcus pneumoniae strain 2014C08-275]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPPAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEELMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAQLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=791567 Q7622_RS09320 WP_000904848.1 1824699..1825598(-) (comR) [Streptococcus pneumoniae strain 2014C08-275]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTCCTGCTTATTTAGAATTGAAATATCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAGAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGCAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus pyogenes MGAS8232	36.577	99.666	0.365
comR	Streptococcus pyogenes MGAS315	36	100	0.361
comR	Streptococcus suis P1/7	37.113	97.324	0.361
comR	Streptococcus suis 05ZYH33	37.113	97.324	0.361