Detailed information NTG0791023

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: Q7626_RS01225
• Genome accession: NZ_CP131707
• Coordinates: 228200..229198 (+)
• Length: 332 a.a.
• NCBI ID: WP_001810337.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 2018C08-270
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 223200..234198

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7626_RS01205 (Q7626_01205)	leuS	223341..225842 (+)	2502	WP_000011740.1	leucine--tRNA ligase	-
Q7626_RS01210 (Q7626_01210)	-	226036..226731 (+)	696	WP_001144913.1	GNAT family protein	-
Q7626_RS01215 (Q7626_01215)	-	226743..227159 (+)	417	WP_000628407.1	GNAT family N-acetyltransferase	-
Q7626_RS01220 (Q7626_01220)	-	227974..228066 (-)	93	WP_000970381.1	type I toxin-antitoxin system Fst family toxin	-
Q7626_RS01225 (Q7626_01225)	ruvB	228200..229198 (+)	999	WP_001810337.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
Q7626_RS01230 (Q7626_01230)	-	229179..229751 (+)	573	WP_001098884.1	nucleotidyltransferase family protein	-
Q7626_RS01235 (Q7626_01235)	-	229982..230740 (+)	759	WP_000466714.1	isoprenyl transferase	-
Q7626_RS01240 (Q7626_01240)	-	230749..231552 (+)	804	WP_000189871.1	phosphatidate cytidylyltransferase	-
Q7626_RS01245 (Q7626_01245)	eeP	231574..232833 (+)	1260	WP_000900660.1	RIP metalloprotease RseP	Regulator

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37306.76 Da
• Isoelectric Point: 4.5053

>NTDB_id=791023 Q7626_RS01225 WP_001810337.1 228200..229198(+) (ruvB) [Streptococcus pneumoniae strain 2018C08-270]
MSRILDNEMMGDEELVERTLRPQYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPVIEKAGDLVAILNELEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGAGEGSRSVHLELPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAHADLTEIVERTADIFEMEITHEAASELALRSRGTPRIANRLLKRVRDFAQIMGNGVID
DIITDKALTMLDVDHEGLDYVDQKILRTMIEMYSGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRVATAK
AYEHLGYEYSEK

Nucleotide

• Length: 999 bp

>NTDB_id=791023 Q7626_RS01225 WP_001810337.1 228200..229198(+) (ruvB) [Streptococcus pneumoniae strain 2018C08-270]
ATGAGTAGAATTTTAGATAATGAGATGATGGGTGATGAGGAGTTAGTAGAACGCACGCTCCGTCCTCAGTATTTACGTGA
ATATATTGGTCAGGATAAGGTTAAGGATCAGCTTCAGATCTTTATCGAAGCCGCTAAAATGCGGGATGAAGCGCTGGATC
ATGTGCTCTTATTTGGCCCTCCAGGGCTTGGGAAAACAACCATGGCTTTTGTCATTGCCAATGAACTGGGAGTCAATCTC
AAGCAAACGTCTGGTCCTGTTATCGAAAAAGCGGGTGATTTGGTAGCGATTTTGAATGAGTTAGAGCCTGGAGATGTCCT
CTTTATTGACGAGATTCATCGCTTACCCATGTCAGTGGAAGAAGTGCTTTATAGTGCCATGGAGGACTTCTACATCGATA
TTATGATTGGGGCTGGTGAAGGCAGTCGCAGTGTTCATTTGGAGTTGCCTCCTTTTACCTTGATTGGTGCGACGACTCGG
GCTGGTATGCTCTCAAATCCACTACGGGCACGTTTTGGGATTACAGGTCATATGGAGTATTATGCCCATGCTGACTTGAC
AGAAATTGTCGAGCGGACGGCAGATATTTTTGAGATGGAAATCACTCATGAGGCAGCATCTGAGTTGGCCCTACGTAGTC
GTGGAACCCCTCGTATTGCCAATCGTCTCCTCAAGCGCGTGCGCGATTTTGCCCAGATAATGGGGAATGGGGTAATCGAT
GATATTATTACCGATAAGGCTTTGACTATGCTGGATGTTGACCATGAAGGTTTGGACTATGTGGATCAAAAAATCCTTCG
TACCATGATTGAGATGTACAGTGGAGGACCTGTTGGTCTAGGAACTCTTTCTGTGAATATCGCCGAAGAGCGTGAGACAG
TTGAAGATATGTATGAGCCTTACTTGATTCAAAAAGGTTTTATCATGCGGACACGGTCTGGACGGGTGGCGACTGCTAAG
GCATATGAGCACTTAGGTTATGAATACAGTGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae R6	99.699	100	0.997
ruvB	Streptococcus pneumoniae D39	99.699	100	0.997
ruvB	Streptococcus pneumoniae TIGR4	99.398	100	0.994
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.429	98.193	0.593
ruvB	Helicobacter pylori 26695	50.774	97.289	0.494
ruvB	Synechocystis sp. PCC 6803	49.84	94.277	0.47