Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   PUW52_RS10630 Genome accession   NZ_CP118078
Coordinates   2084687..2085454 (+) Length   255 a.a.
NCBI ID   WP_274984540.1    Uniprot ID   -
Organism   Streptococcus anginosus strain VSI16     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2079687..2090454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW52_RS10600 (PUW52_10600) comE 2080249..2080998 (-) 750 WP_022526721.1 competence system response regulator transcription factor ComE Regulator
  PUW52_RS10605 (PUW52_10605) comD/comD2 2080998..2082323 (-) 1326 WP_274984617.1 GHKL domain-containing protein Regulator
  PUW52_RS10610 (PUW52_10610) - 2082341..2082487 (-) 147 WP_003029519.1 bacteriocin -
  PUW52_RS10620 (PUW52_10620) rlmH 2082769..2083248 (-) 480 WP_024052476.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PUW52_RS10625 (PUW52_10625) htrA 2083442..2084632 (+) 1191 WP_070812015.1 trypsin-like peptidase domain-containing protein Regulator
  PUW52_RS10630 (PUW52_10630) spo0J 2084687..2085454 (+) 768 WP_274984540.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29648.23 Da        Isoelectric Point: 9.5406

>NTDB_id=789872 PUW52_RS10630 WP_274984540.1 2084687..2085454(+) (spo0J) [Streptococcus anginosus strain VSI16]
MEKYKYITLNDIQTNPYQPRKEFSEEKIAELASSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLTNIPAIIKE
VTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIALTMGKSRPYITNSVRLLNLPLNIIEAIKEGNISQGHA
RLLINLSEKEQNQWFDKILSQSLSVRQLEKQLHFQQTKTVTKNKHHLFLKEEEKRLKKIFGTEISLQFSKQSQSGKICIH
FSNLEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=789872 PUW52_RS10630 WP_274984540.1 2084687..2085454(+) (spo0J) [Streptococcus anginosus strain VSI16]
ATGGAAAAATATAAATATATCACACTTAATGACATCCAAACAAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTGCTGAACTTGCTAGTTCTATAAAAGAACATGGGATTATTCAGCCCATCATTGTACGAAAATCTCCGATAATTGGTT
ATGAATTGCTAGCTGGTGAAAGGCGTTTTAGAGCTGCTAAATTAGCAGGCTTAACAAATATACCAGCTATTATAAAAGAA
GTAACAGATGATGAAATGATGAAGCAAGCCATCATTGAAAATTTACAACGAGAAGATTTAAATCCTATAGAAGAAGCACA
ATCTTATCAATATTTGATTGACAAAGGGTTGACACATAAAGAAATCGCTCTAACTATGGGAAAATCACGTCCTTATATTA
CAAATTCCGTCCGGTTATTAAATTTACCTCTCAATATTATCGAAGCGATAAAAGAAGGAAATATTTCTCAGGGACACGCT
CGTCTGCTCATTAATCTCTCAGAAAAAGAGCAAAATCAGTGGTTTGATAAAATCTTATCTCAAAGCCTTTCAGTTCGACA
GTTAGAAAAACAATTGCATTTCCAACAGACAAAAACTGTAACAAAAAATAAACATCATCTCTTCCTCAAAGAGGAAGAAA
AAAGATTAAAAAAGATATTTGGTACAGAGATTTCTCTTCAATTTTCTAAACAATCTCAATCAGGGAAAATTTGTATTCAT
TTTTCAAACCTAGAAGAATATCAAAGAATTATTGACAGCTTTAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-190)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.51

100

0.545