Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   PUW52_RS03530 Genome accession   NZ_CP118078
Coordinates   694945..695949 (+) Length   334 a.a.
NCBI ID   WP_117625130.1    Uniprot ID   -
Organism   Streptococcus anginosus strain VSI16     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 689945..700949
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW52_RS03515 (PUW52_03515) - 691490..693139 (+) 1650 WP_024051863.1 sulfatase-like hydrolase/transferase -
  PUW52_RS03520 (PUW52_03520) - 693428..693622 (-) 195 Protein_654 hypothetical protein -
  PUW52_RS03525 (PUW52_03525) - 693597..694679 (-) 1083 WP_024051862.1 Xaa-Pro peptidase family protein -
  PUW52_RS03530 (PUW52_03530) ccpA 694945..695949 (+) 1005 WP_117625130.1 catabolite control protein A Regulator
  PUW52_RS03535 (PUW52_03535) - 696042..697040 (+) 999 WP_024051860.1 glycosyltransferase -
  PUW52_RS03540 (PUW52_03540) - 697042..698355 (+) 1314 WP_024051859.1 glycosyltransferase family 4 protein -
  PUW52_RS03545 (PUW52_03545) - 698382..698723 (+) 342 WP_070812132.1 hypothetical protein -
  PUW52_RS03550 (PUW52_03550) micA 699004..699705 (+) 702 WP_003025150.1 response regulator YycF Regulator

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37023.11 Da        Isoelectric Point: 5.8267

>NTDB_id=789843 PUW52_RS03530 WP_117625130.1 694945..695949(+) (ccpA) [Streptococcus anginosus strain VSI16]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITSSYFA
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDNKQATMDVVERLTKNNQKIAFVSGPLVDDINGKIRLAGYKEALKKAKLTYSEGLVFESKYSYDDGYQLAERIIASK
ATAAFVTGDELAAGLLNSLSDKGVNVPEDFEIITSDDSQVARFTRPNLTTIGQPLYDLGAISMRMLTKIMHKEELEEREV
VLAHGLIERRSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=789843 PUW52_RS03530 WP_117625130.1 694945..695949(+) (ccpA) [Streptococcus anginosus strain VSI16]
ATGAACACAGATGATACTGTAACGATTTATGATGTCGCCCGTGAAGCGGGAGTTTCAATGGCAACCGTTAGCCGTGTGGT
AAATGGAAATAAAAATGTAAAGGAAAATACAAGAAAAAAAGTTTTGGAAGTGATTGACCGCCTTGATTATCGTCCAAATG
CAGTTGCTCGTGGACTTGCCAGTAAGAAAACGACAACAGTAGGAGTTGTCATTCCAAACATTACAAGCAGTTATTTTGCA
ACGCTTGCAAAAGGAATTGATGATATCGCAGAGATGTACAAATATAATATTGTCTTAGCCAATAGTGATGAAGATGATGA
CAAAGAAGTTTCTGTTGTCAATACGCTGTTCTCAAAACAAGTAGATGGTATCATTTTTATGGGCTATCATTTAACAGAAA
AGATTCGCTCCGAGTTTTCTCGTTCGCGGACGCCAGTTGTGCTTGCTGGCACAGTTGATGTGGAGCATCAATTACCAAGT
GTGAATATTGACAATAAGCAAGCAACCATGGATGTAGTTGAACGTCTTACGAAAAATAATCAAAAAATTGCTTTTGTAAG
CGGACCTTTGGTGGATGATATCAATGGTAAGATTCGTTTAGCTGGTTACAAAGAAGCTTTGAAGAAAGCTAAACTTACTT
ATAGTGAAGGATTGGTTTTTGAGTCAAAATACAGCTATGATGATGGTTATCAATTAGCAGAACGGATCATTGCTTCTAAA
GCTACAGCAGCTTTTGTGACTGGTGATGAGCTGGCGGCTGGGTTGTTAAATAGTTTATCAGACAAGGGTGTAAATGTACC
AGAAGACTTTGAAATCATCACTAGCGATGATTCACAAGTAGCACGCTTTACTCGTCCAAATTTGACAACTATTGGTCAGC
CTTTGTATGACCTTGGTGCGATTAGTATGCGCATGCTGACTAAGATTATGCACAAGGAAGAGCTAGAAGAACGCGAAGTG
GTATTAGCTCATGGCCTTATTGAGCGCCGTTCAACAAGGAAGTAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

88.922

100

0.889
  ccpA Streptococcus pneumoniae D39

87.725

100

0.877
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

99.102

0.572