Detailed information NTG0789162

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: PT671_RS12780
• Genome accession: NZ_CP118021
• Coordinates: 2591823..2592980 (+)
• Length: 385 a.a.
• NCBI ID: WP_003219693.1
• Uniprot ID: -
• Organism: Bacillus spizizenii strain B-354
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2586823..2597980

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PT671_RS12760	tuaH	2587342..2588535 (+)	1194	WP_079996656.1	teichuronic acid biosynthesis protein TuaH	-
PT671_RS12765	-	2588680..2589756 (+)	1077	WP_003219687.1	MraY family glycosyltransferase	-
PT671_RS12770	-	2589830..2590954 (-)	1125	WP_003219689.1	LCP family protein	-
PT671_RS12775	-	2590954..2591607 (-)	654	WP_003219692.1	YigZ family protein	-
PT671_RS12780	degS	2591823..2592980 (+)	1158	WP_003219693.1	two-component sensor histidine kinase DegS	Regulator
PT671_RS12785	degU	2593063..2593752 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
PT671_RS12790	-	2593850..2594695 (+)	846	WP_003219702.1	DegV family protein	-
PT671_RS12795	comFA	2594803..2596185 (+)	1383	WP_079996654.1	ATP-dependent helicase ComFA	Machinery gene
PT671_RS12800	comFB	2596254..2596550 (+)	297	WP_003219707.1	late competence protein ComFB	-
PT671_RS12805	comFC	2596514..2597236 (+)	723	WP_013308058.1	ComF family protein	Machinery gene
PT671_RS12810	-	2597309..2597728 (+)	420	WP_003219710.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44888.69 Da
• Isoelectric Point: 6.2957

>NTDB_id=789162 PT671_RS12780 WP_003219693.1 2591823..2592980(+) (degS) [Bacillus spizizenii strain B-354]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLSIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDKRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=789162 PT671_RS12780 WP_003219693.1 2591823..2592980(+) (degS) [Bacillus spizizenii strain B-354]
ATGAATAAAACAAAGATGGATTCCAAAGTTCTGGATTCTATTTTGATGAAGATGCTAAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTTGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTTATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGGTTCAGTGAAGAAGAAATCCGCAATGCTTACGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAACTGCGGGAACGCCGGGATGATTTAGAGCGAAGATTGTTAGGCCTTCAGGAAATCATTGAGC
GGTCTGAATCATTAGTAAGCCAAATAACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAGGTCGGACTGCTTCTT
GCGGATGCTCAGGCAAAACAGGATTTCGGCTTAAGCATTATTGAGGCACAGGAAGAAGAGCGAAAAAGAGTCTCCAGAGA
AATTCACGACGGACCTGCTCAAATGCTGGCAAATGTGATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCTGAGGACGGATTCCAAGAAATTAAAAATCTCCGTCAAAATGTGCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAAGAATA
TAACGGAAAGGTCAAAATACATTTTCAGTGCATTGGTGAAACAGAGGATAAGCGGCTTGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAACGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAAATT
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGAAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGTTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACCATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	99.481	100	0.995