Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV/pilI   Type   Regulator
Locus tag   Q6379_RS02660 Genome accession   NZ_CP130892
Coordinates   517683..518291 (+) Length   202 a.a.
NCBI ID   WP_304672949.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain NJ204705     
Function   repress natural transformation; antagonize ComP (predicted from homology)   
Competence regulation

Genomic Context

Location: 512683..523291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q6379_RS02635 (Q6379_02635) - 513124..513456 (+) 333 WP_003687908.1 hypothetical protein -
  Q6379_RS02640 (Q6379_02640) - 513786..514295 (+) 510 WP_003687909.1 isoprenylcysteine carboxyl methyltransferase family protein -
  Q6379_RS02645 (Q6379_02645) - 514527..515108 (-) 582 WP_003690895.1 superoxide dismutase -
  Q6379_RS02650 (Q6379_02650) dnaB 515272..516678 (+) 1407 WP_003690896.1 replicative DNA helicase -
  Q6379_RS02655 (Q6379_02655) pilH 516986..517651 (+) 666 WP_047921008.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  Q6379_RS02660 (Q6379_02660) pilV/pilI 517683..518291 (+) 609 WP_304672949.1 type IV pilus modification protein PilV Regulator
  Q6379_RS02665 (Q6379_02665) pilJ 518288..519223 (+) 936 WP_047921001.1 PilW family protein Machinery gene
  Q6379_RS02670 (Q6379_02670) pilK 519202..519810 (+) 609 WP_047921003.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  Q6379_RS02675 (Q6379_02675) pilL 519812..520285 (+) 474 WP_304672966.1 PilX family type IV pilin Machinery gene
  Q6379_RS02680 (Q6379_02680) - 520355..520663 (-) 309 WP_003706588.1 AzlD family protein -
  Q6379_RS02685 (Q6379_02685) - 520660..521371 (-) 712 Protein_521 AzlC family ABC transporter permease -
  Q6379_RS02690 (Q6379_02690) dut 521537..521989 (+) 453 WP_003701071.1 dUTP diphosphatase -
  Q6379_RS02695 (Q6379_02695) dapC 522061..523248 (+) 1188 WP_003701073.1 succinyldiaminopimelate transaminase -

Sequence

Protein


Download         Length: 202 a.a.        Molecular weight: 22189.17 Da        Isoelectric Point: 4.9915

>NTDB_id=788138 Q6379_RS02660 WP_304672949.1 517683..518291(+) (pilV/pilI) [Neisseria gonorrhoeae strain NJ204705]
MKNNDCLRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYTKSYPSTSSNGDFKLDNLISKRDLAKTQLDRFGYELKNALPDAVAIHYTVCKDLSGDAPTLSGNTFFPNCDNKANG
DTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 609 bp        

>NTDB_id=788138 Q6379_RS02660 WP_304672949.1 517683..518291(+) (pilV/pilI) [Neisseria gonorrhoeae strain NJ204705]
ATGAAGAATAATGATTGCTTGCGCCTGAAAAATCCCCAGTCCGGTATGGCGTTGATAGAAGTCTTGGTCGCTATGCTCGT
TCTGACCATCGGTATTTTGGCATTGTTGTCCGTACAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAGACACAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACACGAAGTCGTACCCCTCCACTTCCTCTAACGGCGATTTCAAGCTTGATAATTTGATAAGTAAGAGGGA
TTTGGCAAAGACCCAGTTGGACAGGTTCGGTTATGAATTGAAAAATGCCTTGCCGGATGCGGTAGCTATTCATTACACCG
TCTGCAAGGATTTGTCGGGTGACGCGCCGACATTGTCCGGCAATACTTTTTTTCCAAATTGCGACAATAAGGCAAACGGG
GATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTTCCCGTACGAATCTTGAGGTGAGCGG
CGACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGTGAATGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV/pilI Neisseria gonorrhoeae MS11

91.584

100

0.916
  pilV Neisseria meningitidis 8013

84.951

100

0.866