Detailed information NTG0787527

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG328_RS17700
• Genome accession: NZ_CP130730
• Coordinates: 3927182..3928468 (-)
• Length: 428 a.a.
• NCBI ID: WP_033285988.1
• Uniprot ID: A0ABW6MII4
• Organism: Streptomyces sp. NBC_01518
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3922182..3933468

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG328_RS17690 (OG328_17670)	-	3923336..3925960 (-)	2625	WP_405839986.1	valine--tRNA ligase	-
OG328_RS17695 (OG328_17675)	-	3926097..3927104 (+)	1008	WP_405839988.1	hypothetical protein	-
OG328_RS17700 (OG328_17680)	clpX	3927182..3928468 (-)	1287	WP_033285988.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG328_RS17705 (OG328_17685)	clpP	3928628..3929308 (-)	681	WP_405839990.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG328_RS17710 (OG328_17690)	clpP	3929358..3929960 (-)	603	WP_033285987.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG328_RS17715 (OG328_17695)	tig	3930299..3931663 (-)	1365	WP_405839992.1	trigger factor	-
OG328_RS17730 (OG328_17710)	-	3932255..3932488 (-)	234	WP_405839994.1	hypothetical protein	-
OG328_RS17735 (OG328_17715)	-	3932535..3932729 (-)	195	WP_026151384.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46841.63 Da
• Isoelectric Point: 4.7360

>NTDB_id=787527 OG328_RS17700 WP_033285988.1 3927182..3928468(-) (clpX) [Streptomyces sp. NBC_01518]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELQAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=787527 OG328_RS17700 WP_033285988.1 3927182..3928468(-) (clpX) [Streptomyces sp. NBC_01518]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTACGTCGTCGGCCAGGAGTCG
GCGAAGAAGGCACTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGCCAGAGCCG
CGAGGACGCCATCGAGCTGGCGAAGTCCAACATCCTCCTGCTCGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCCCAGA
CCCTGGCCCGCATGCTGAACGTGCCGTTCGCGATCGCCGACGCGACCGCGCTCACGGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGATGTGAGCGGCGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAGGGCACCACGGCCTCGGTCCCGCCGCAGGGCGGCCGTAAACACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCTCGGGCCTGGAGAAGCTCATCGAGTCCAGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAGCTGCAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACTTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTGCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCACTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACG
GCGGACGTCGTCCTGTCGAACGTCAACCCGACCCTGATCCCGCGCGACGCACGCGGCCGGGGCCCGGGGGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.189	93.925	0.584
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516