Detailed information NTG0787372

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG382_RS26310
• Genome accession: NZ_CP130722
• Coordinates: 5758326..5759624 (+)
• Length: 432 a.a.
• NCBI ID: WP_266746184.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01238
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5753326..5764624

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG382_RS26280 (OG382_26310)	-	5754312..5754506 (+)	195	WP_266746187.1	hypothetical protein	-
OG382_RS26295 (OG382_26325)	tig	5755119..5756534 (+)	1416	WP_266746186.1	trigger factor	-
OG382_RS26300 (OG382_26330)	clpP	5756798..5757406 (+)	609	WP_266752174.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG382_RS26305 (OG382_26335)	clpP	5757488..5758168 (+)	681	WP_323183850.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG382_RS26310 (OG382_26340)	clpX	5758326..5759624 (+)	1299	WP_266746184.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG382_RS26315 (OG382_26345)	-	5759705..5760784 (-)	1080	WP_405681700.1	hypothetical protein	-
OG382_RS26320 (OG382_26350)	-	5760908..5763556 (+)	2649	WP_266746183.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47303.07 Da
• Isoelectric Point: 4.8306

>NTDB_id=787372 OG382_RS26310 WP_266746184.1 5758326..5759624(+) (clpX) [Streptomyces sp. NBC_01238]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENSGAQGRDDGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDDGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=787372 OG382_RS26310 WP_266746184.1 5758326..5759624(+) (clpX) [Streptomyces sp. NBC_01238]
GTGGCACGCATCGGTGATGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAACTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACAGCGGCGCCCAGGGCCG
GGACGACGGCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTTCTCGCGCAGA
CCCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGTGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAATCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAATGTGCTGTTCATCGTGGGCGGTGCCTTCTCCGGTCTGGAGCGAATTATCGAGTCCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGTTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGGCTGCCCGTCCTCACCTCGGTCCACAACCTGGACCGC
GAGGCACTGCTGCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTATCAACGCCTGTTCGAACTCGACGGCGT
CGAGCTGGACTTCGACCGTCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGCCTGC
GGGCCATCATGGAAGAGGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTCGTCCGCAACAACGTGAACCCGACGCTGGTCCCGCGCGAACCGCGCACGATCGGCAAGGGCGACGACGGCCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509