Detailed information NTG0786571

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: Q3Y68_RS24630
• Genome accession: NZ_CP130681
• Coordinates: 5508553..5509839 (+)
• Length: 428 a.a.
• NCBI ID: WP_061444769.1
• Uniprot ID: A0ABW8BH06
• Organism: Streptomyces sp. HUAS CX7
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5503553..5514839

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q3Y68_RS24600 (Q3Y68_24600)	-	5503628..5504713 (+)	1086	WP_304380945.1	site-specific integrase	-
Q3Y68_RS24615 (Q3Y68_24615)	tig	5505257..5506660 (+)	1404	WP_165287537.1	trigger factor	-
Q3Y68_RS24620 (Q3Y68_24620)	clpP	5506991..5507596 (+)	606	WP_051005918.1	ATP-dependent Clp protease proteolytic subunit	Regulator
Q3Y68_RS24625 (Q3Y68_24625)	clpP	5507647..5508360 (+)	714	WP_102927978.1	ATP-dependent Clp protease proteolytic subunit	Regulator
Q3Y68_RS24630 (Q3Y68_24630)	clpX	5508553..5509839 (+)	1287	WP_061444769.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
Q3Y68_RS24635 (Q3Y68_24635)	-	5509904..5510887 (-)	984	WP_233646678.1	hypothetical protein	-
Q3Y68_RS24640 (Q3Y68_24640)	-	5511026..5513650 (+)	2625	WP_102927980.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46770.55 Da
• Isoelectric Point: 4.7788

>NTDB_id=786571 Q3Y68_RS24630 WP_061444769.1 5508553..5509839(+) (clpX) [Streptomyces sp. HUAS CX7]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEGRAGAKGIGFGAQIRSKREIESKDQFEQVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYERLFELDGVELDFERGALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=786571 Q3Y68_RS24630 WP_061444769.1 5508553..5509839(+) (clpX) [Streptomyces sp. HUAS CX7]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACCA
GCGAGGTGCGCTGGGAGGAGCTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGAGCTACGTGGTCGGCCAGGAGGCG
GCCAAGAAGGCCCTCTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACGGCGGCGCCCAGGGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTCCTCGCCCAGA
CCCTCGCCCGCATGCTGAACGTCCCGTTCGCGATCGCCGACGCCACGGCGCTCACCGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGTGAAAACCCCTCCATCACGCGCGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACGGCCTCCGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGATCATCGAGGGCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGCAGATCCGCTCCAAGCGGGAGATCGAGTCCAAGGACCAGTTCGAGCAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGACTGCCCGTCATCACCTCCGTCCACAACCTCGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGGGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGAGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTCTCCAACGTCAACCCGACGCTGATTCCGCGGGATTCACGGGGACGCGGCTCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.779	94.159	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521