Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | IL310_RS02885 | Genome accession | NZ_CP117409 |
| Coordinates | 176472..176768 (+) | Length | 98 a.a. |
| NCBI ID | WP_033900709.1 | Uniprot ID | A0A0H1RKN4 |
| Organism | Lactococcus lactis strain LB7 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 171472..181768
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IL310_RS02865 (IL310_02870) | comGA | 173807..174745 (+) | 939 | WP_058206479.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| IL310_RS02870 (IL310_02875) | comGB | 174639..175712 (+) | 1074 | WP_201248649.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| IL310_RS02875 (IL310_02880) | comGC | 175726..176109 (+) | 384 | WP_012898622.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| IL310_RS02880 (IL310_02885) | comGD | 176069..176500 (+) | 432 | WP_012898621.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| IL310_RS02885 (IL310_02890) | comGE | 176472..176768 (+) | 297 | WP_033900709.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| IL310_RS02890 (IL310_02895) | comGF | 176731..177177 (+) | 447 | WP_201248646.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| IL310_RS02895 (IL310_02900) | comGG | 177216..177500 (+) | 285 | WP_025017139.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| IL310_RS02900 (IL310_02905) | - | 177582..178019 (+) | 438 | WP_201248645.1 | zinc-dependent MarR family transcriptional regulator | - |
| IL310_RS02905 (IL310_02910) | - | 178016..178858 (+) | 843 | WP_015427160.1 | metal ABC transporter substrate-binding protein | - |
| IL310_RS02910 (IL310_02915) | - | 179035..179772 (+) | 738 | WP_201248644.1 | metal ABC transporter ATP-binding protein | - |
| IL310_RS02915 (IL310_02920) | - | 179765..180574 (+) | 810 | WP_014570791.1 | metal ABC transporter permease | - |
| IL310_RS02920 (IL310_02925) | - | 180612..181478 (-) | 867 | WP_025017140.1 | RluA family pseudouridine synthase | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 11048.89 Da Isoelectric Point: 5.6957
>NTDB_id=784621 IL310_RS02885 WP_033900709.1 176472..176768(+) (comGE) [Lactococcus lactis strain LB7]
MENLKRKSVKAYLLLESLISIALLAFLVSFIVSSLVQVRQKDTEENQKIEALNVAQMAIESHLTELSINGSDIKIKENQN
LLIISNHGKEIMQLELQS
MENLKRKSVKAYLLLESLISIALLAFLVSFIVSSLVQVRQKDTEENQKIEALNVAQMAIESHLTELSINGSDIKIKENQN
LLIISNHGKEIMQLELQS
Nucleotide
Download Length: 297 bp
>NTDB_id=784621 IL310_RS02885 WP_033900709.1 176472..176768(+) (comGE) [Lactococcus lactis strain LB7]
GTGGAAAATTTAAAAAGAAAATCAGTTAAGGCATATTTGCTTTTGGAAAGTTTAATTAGTATAGCTCTACTCGCTTTTCT
AGTCAGCTTTATCGTAAGTTCTCTTGTGCAAGTAAGACAAAAAGATACGGAAGAAAATCAAAAGATTGAAGCTTTAAACG
TGGCACAAATGGCGATTGAAAGTCATTTAACAGAATTATCAATCAACGGTTCTGATATAAAGATAAAAGAAAACCAAAAT
TTACTGATTATTAGTAATCATGGGAAGGAAATTATGCAACTTGAACTTCAAAGTTAA
GTGGAAAATTTAAAAAGAAAATCAGTTAAGGCATATTTGCTTTTGGAAAGTTTAATTAGTATAGCTCTACTCGCTTTTCT
AGTCAGCTTTATCGTAAGTTCTCTTGTGCAAGTAAGACAAAAAGATACGGAAGAAAATCAAAAGATTGAAGCTTTAAACG
TGGCACAAATGGCGATTGAAAGTCATTTAACAGAATTATCAATCAACGGTTCTGATATAAAGATAAAAGAAAACCAAAAT
TTACTGATTATTAGTAATCATGGGAAGGAAATTATGCAACTTGAACTTCAAAGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
67.01 |
98.98 |
0.663 |