Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | PO908_RS01285 | Genome accession | NZ_CP117042 |
| Coordinates | 229118..230071 (+) | Length | 317 a.a. |
| NCBI ID | WP_021001235.1 | Uniprot ID | A0AAP6BRI6 |
| Organism | Streptococcus anginosus strain CGMH_KH1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 224118..235071
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PO908_RS01245 (PO908_01245) | - | 225011..225376 (+) | 366 | WP_003027003.1 | DUF1033 family protein | - |
| PO908_RS01250 (PO908_01250) | comYA | 225446..226387 (+) | 942 | WP_394468008.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| PO908_RS01255 (PO908_01255) | comYB | 226329..227351 (+) | 1023 | WP_041783985.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| PO908_RS01260 (PO908_01260) | comYC | 227348..227665 (+) | 318 | WP_003028473.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| PO908_RS01265 (PO908_01265) | comYD | 227625..228053 (+) | 429 | WP_021001232.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| PO908_RS01270 (PO908_01270) | comGE/cglE | 228025..228318 (+) | 294 | WP_021001233.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| PO908_RS01275 (PO908_01275) | comGF/cglF | 228302..228739 (+) | 438 | WP_041783987.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| PO908_RS01280 (PO908_01280) | comGG | 228720..229046 (+) | 327 | WP_021001234.1 | competence type IV pilus minor pilin ComGG | - |
| PO908_RS01285 (PO908_01285) | comYH | 229118..230071 (+) | 954 | WP_021001235.1 | class I SAM-dependent methyltransferase | Machinery gene |
| PO908_RS01290 (PO908_01290) | - | 230118..231317 (+) | 1200 | WP_021001236.1 | acetate kinase | - |
| PO908_RS01295 (PO908_01295) | glmS | 231669..233483 (+) | 1815 | WP_003026983.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36049.93 Da Isoelectric Point: 4.3472
>NTDB_id=782221 PO908_RS01285 WP_021001235.1 229118..230071(+) (comYH) [Streptococcus anginosus strain CGMH_KH1]
MNFEKIEQAYTLLLENVQEIQNDLLTSFYDALIEQNGSYLDGDIELDSVRQNNEKLKALKLSKEEWRRAYQFLLMKAAQT
EPLQANHQFTPDSIGFILTFLIDQLSKKEHIDILEIGSGMGNLAETILNNTKKNVDYLGLELDDLLIDISASIADVMDAK
VSFVQGDAVRPQVLKESDVIISDLPVGFYPDDNIAMRYEVASRQEHTYAHHLLMEQSLKYLKSDGYAIFLAPNDLLTSSQ
SDLLKKWLQKHAQIVAMIALPESLFGNAAYAKTIFVLKKQDEQAIQPFVYALSDLQNQADLLTFSEKFQNWSQESEI
MNFEKIEQAYTLLLENVQEIQNDLLTSFYDALIEQNGSYLDGDIELDSVRQNNEKLKALKLSKEEWRRAYQFLLMKAAQT
EPLQANHQFTPDSIGFILTFLIDQLSKKEHIDILEIGSGMGNLAETILNNTKKNVDYLGLELDDLLIDISASIADVMDAK
VSFVQGDAVRPQVLKESDVIISDLPVGFYPDDNIAMRYEVASRQEHTYAHHLLMEQSLKYLKSDGYAIFLAPNDLLTSSQ
SDLLKKWLQKHAQIVAMIALPESLFGNAAYAKTIFVLKKQDEQAIQPFVYALSDLQNQADLLTFSEKFQNWSQESEI
Nucleotide
Download Length: 954 bp
>NTDB_id=782221 PO908_RS01285 WP_021001235.1 229118..230071(+) (comYH) [Streptococcus anginosus strain CGMH_KH1]
ATGAATTTTGAAAAAATTGAACAGGCTTATACGCTCTTGTTAGAAAATGTCCAAGAAATCCAAAATGATCTTTTAACGAG
CTTTTATGATGCTTTGATAGAGCAAAATGGCAGCTATTTGGACGGGGATATCGAACTAGATAGTGTTCGGCAGAACAATG
AAAAACTGAAAGCGTTGAAATTAAGTAAAGAAGAATGGCGTCGAGCCTACCAATTTTTGCTGATGAAAGCAGCTCAAACA
GAGCCTTTGCAAGCCAATCATCAATTTACTCCAGATTCTATCGGGTTTATCTTAACTTTTCTCATTGACCAATTGAGTAA
AAAAGAACACATTGATATTTTGGAAATTGGTAGCGGAATGGGGAATTTAGCAGAGACCATTCTCAATAATACAAAGAAAA
ATGTGGATTATCTAGGACTGGAATTGGACGATCTGCTAATTGATATATCAGCCAGTATCGCAGATGTGATGGATGCAAAA
GTTAGTTTTGTGCAAGGTGATGCAGTGCGTCCGCAAGTATTGAAAGAAAGCGATGTGATTATCAGTGATTTACCAGTTGG
CTTTTATCCTGATGATAACATTGCGATGCGCTATGAAGTGGCTAGTAGACAGGAGCATACTTATGCTCATCATTTGTTAA
TGGAACAATCGCTCAAGTATCTCAAATCGGATGGTTATGCTATTTTCCTTGCACCGAATGATTTATTGACTAGTTCGCAA
AGTGATTTATTGAAGAAATGGCTACAAAAGCATGCACAAATAGTTGCAATGATTGCGTTACCAGAGTCTCTTTTTGGAAA
TGCAGCATACGCTAAAACAATTTTTGTACTGAAAAAGCAAGATGAACAAGCTATCCAACCATTTGTTTATGCTTTATCTG
ATTTGCAGAATCAAGCGGATTTATTGACATTTAGCGAAAAGTTTCAAAATTGGAGCCAAGAAAGTGAAATTTAA
ATGAATTTTGAAAAAATTGAACAGGCTTATACGCTCTTGTTAGAAAATGTCCAAGAAATCCAAAATGATCTTTTAACGAG
CTTTTATGATGCTTTGATAGAGCAAAATGGCAGCTATTTGGACGGGGATATCGAACTAGATAGTGTTCGGCAGAACAATG
AAAAACTGAAAGCGTTGAAATTAAGTAAAGAAGAATGGCGTCGAGCCTACCAATTTTTGCTGATGAAAGCAGCTCAAACA
GAGCCTTTGCAAGCCAATCATCAATTTACTCCAGATTCTATCGGGTTTATCTTAACTTTTCTCATTGACCAATTGAGTAA
AAAAGAACACATTGATATTTTGGAAATTGGTAGCGGAATGGGGAATTTAGCAGAGACCATTCTCAATAATACAAAGAAAA
ATGTGGATTATCTAGGACTGGAATTGGACGATCTGCTAATTGATATATCAGCCAGTATCGCAGATGTGATGGATGCAAAA
GTTAGTTTTGTGCAAGGTGATGCAGTGCGTCCGCAAGTATTGAAAGAAAGCGATGTGATTATCAGTGATTTACCAGTTGG
CTTTTATCCTGATGATAACATTGCGATGCGCTATGAAGTGGCTAGTAGACAGGAGCATACTTATGCTCATCATTTGTTAA
TGGAACAATCGCTCAAGTATCTCAAATCGGATGGTTATGCTATTTTCCTTGCACCGAATGATTTATTGACTAGTTCGCAA
AGTGATTTATTGAAGAAATGGCTACAAAAGCATGCACAAATAGTTGCAATGATTGCGTTACCAGAGTCTCTTTTTGGAAA
TGCAGCATACGCTAAAACAATTTTTGTACTGAAAAAGCAAGATGAACAAGCTATCCAACCATTTGTTTATGCTTTATCTG
ATTTGCAGAATCAAGCGGATTTATTGACATTTAGCGAAAAGTTTCAAAATTGGAGCCAAGAAAGTGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
61.905 |
99.369 |
0.615 |
| comYH | Streptococcus mutans UA159 |
61.587 |
99.369 |
0.612 |