Detailed information NTG0780156

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: PNF30_RS02740
• Genome accession: NZ_CP116774
• Coordinates: 563217..564392 (+)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain SRCM125915
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 558217..569392

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PNF30_RS02720 (PNF30_02720)	tuaH	558819..560015 (+)	1197	WP_272511011.1	teichuronic acid biosynthesis protein TuaH	-
PNF30_RS02725 (PNF30_02725)	-	560150..561217 (+)	1068	WP_048237563.1	glycosyltransferase family 4 protein	-
PNF30_RS02730 (PNF30_02730)	-	561253..562344 (-)	1092	WP_095409678.1	LCP family protein	-
PNF30_RS02735 (PNF30_02735)	-	562329..562997 (-)	669	WP_272510692.1	YigZ family protein	-
PNF30_RS02740 (PNF30_02740)	degS	563217..564392 (+)	1176	WP_003213166.1	sensor histidine kinase	Regulator
PNF30_RS02745 (PNF30_02745)	degU	564457..565146 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
PNF30_RS02750 (PNF30_02750)	-	565364..566206 (+)	843	WP_095409677.1	DegV family protein	-
PNF30_RS02755 (PNF30_02755)	comFA	566327..567724 (+)	1398	WP_272510693.1	DEAD/DEAH box helicase	Machinery gene
PNF30_RS02760 (PNF30_02760)	-	567774..568067 (+)	294	WP_041088040.1	late competence development ComFB family protein	-
PNF30_RS02765 (PNF30_02765)	comFC	568064..568750 (+)	687	WP_263639812.1	ComF family protein	Machinery gene
PNF30_RS02770 (PNF30_02770)	-	568807..569226 (+)	420	WP_039181808.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=780156 PNF30_RS02740 WP_003213166.1 563217..564392(+) (degS) [Bacillus safensis strain SRCM125915]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=780156 PNF30_RS02740 WP_003213166.1 563217..564392(+) (degS) [Bacillus safensis strain SRCM125915]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTTTTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGACAAGCTGGAAGTCCATACAAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTTAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
CCAGCAGCGTGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTTGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTCGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGTCTCAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGAATTTTTAGAGACCGCG
GTACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTGGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841