Detailed information NTG0780072

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: PND17_RS09005
• Genome accession: NZ_CP116772
• Coordinates: 1718492..1719577 (+)
• Length: 361 a.a.
• NCBI ID: WP_011226304.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain strain TSGB 4141
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1713492..1724577

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PND17_RS08980 (PND17_08980)	-	1713746..1714595 (-)	850	Protein_1754	DegV family protein	-
PND17_RS08985 (PND17_08985)	-	1714597..1714971 (-)	375	WP_011680796.1	DUF1149 family protein	-
PND17_RS08990 (PND17_08990)	-	1715172..1715867 (-)	696	WP_271298473.1	GNAT family N-acetyltransferase	-
PND17_RS08995 (PND17_08995)	amiC	1716063..1717556 (+)	1494	WP_011227407.1	ABC transporter permease	Regulator
PND17_RS09000 (PND17_09000)	amiD	1717556..1718482 (+)	927	WP_002946409.1	oligopeptide ABC transporter permease OppC	Regulator
PND17_RS09005 (PND17_09005)	amiE	1718492..1719577 (+)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
PND17_RS10055	amiF	1719570..1720631 (+)	1062	WP_336297435.1	Tn3 family transposase	Regulator
PND17_RS09020 (PND17_09020)	-	1720820..1722244 (-)	1425	WP_271298475.1	amino acid permease	-
PND17_RS09025 (PND17_09025)	-	1722281..1723660 (-)	1380	WP_084829257.1	glutamate decarboxylase	-

Sequence

Protein

• Length: 361 a.a.
• Molecular weight: 39864.62 Da
• Isoelectric Point: 4.7435

>NTDB_id=780072 PND17_RS09005 WP_011226304.1 1718492..1719577(+) (amiE) [Streptococcus thermophilus strain strain TSGB 4141]
MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEENGRVASGSIDYRGKDL
TKFKSHQDWAAIRGAKIATIFQDPMTSLNPIKTIGSQIIEVIVKHQGKTAKEAKKMAIDYMDKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLKEEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE
YATVEEIFYEPCHPYTWSLLSSLPQLADDNGKLFSIPGTPPSLYTPVVGDAFALRSDYALQIDFEEKAPQFQVSDTHWAK
TWLLHEDAPKVDKPAVIQNLHEKILANMGFAHLGDEEEGNA

Nucleotide

• Length: 1086 bp

>NTDB_id=780072 PND17_RS09005 WP_011226304.1 1718492..1719577(+) (amiE) [Streptococcus thermophilus strain strain TSGB 4141]
ATGACAGAAAATAAAAATGTAATATTATCGGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACCGTGTTTTGACAGC
TATTCGAGGGGTTTCTCTTGATTTAGTTGAAGGTGAAGTTTTAGCCTTGGTTGGTGAGTCTGGTTCAGGAAAATCAGTCT
TGACTAAAACTTTTACAGGGATGCTGGAAGAAAATGGTCGTGTAGCTAGCGGATCTATCGACTACCGTGGCAAAGACTTG
ACTAAATTTAAGAGTCACCAAGATTGGGCAGCTATCCGTGGAGCTAAGATTGCAACTATTTTCCAAGATCCAATGACCAG
TCTTAACCCAATTAAGACTATCGGAAGTCAAATTATTGAAGTTATTGTTAAGCACCAAGGGAAAACAGCCAAGGAAGCTA
AAAAAATGGCAATTGATTACATGGACAAGGTTGGTATTCCAGATGCTGAAAAACGTTTCAATGAATATCCTTTCCAATAC
TCTGGTGGGATGCGTCAACGTATCGTTATTGCCATTGCCTTGGCTTGTCGTCCTGATGTCCTTATCTGTGACGAACCAAC
AACTGCCCTTGATGTGACCATTCAAGCTCAAATCATTGACCTCTTGAAATCACTCAAAGAGGAGTATGGTTTCTCGGTCA
TTTTCATTACCCATGACCTTGGCGTCGTAGCAAGTATCGCGGACAAGGTTGCTGTCATGTATGCTGGCGAAATCATTGAA
TACGCAACTGTTGAGGAAATTTTCTATGAGCCTTGTCATCCATACACGTGGAGCTTGCTTTCAAGTCTGCCACAATTGGC
TGATGATAATGGAAAACTCTTCTCAATTCCAGGGACGCCACCATCACTTTATACACCAGTTGTTGGGGATGCCTTTGCCT
TGCGTTCAGATTATGCTTTGCAGATTGATTTTGAGGAAAAAGCACCACAATTCCAAGTTTCAGATACTCACTGGGCTAAG
ACCTGGCTCTTACATGAGGATGCGCCAAAAGTTGATAAACCTGCGGTTATCCAAAATCTACATGAAAAAATCCTAGCCAA
TATGGGATTTGCACATTTAGGAGATGAGGAGGAAGGCAATGCCTGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (29-187)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus thermophilus LMG 18311	100	100	1
amiE	Streptococcus thermophilus LMD-9	100	100	1
amiE	Streptococcus salivarius strain HSISS4	96.953	100	0.97
oppD	Streptococcus mutans UA159	54.441	96.676	0.526