Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   H7R46_RS17730 Genome accession   NZ_AP022302
Coordinates   3726775..3727908 (+) Length   377 a.a.
NCBI ID   WP_086260876.1    Uniprot ID   -
Organism   Acinetobacter sp. BEC1-S18-ESBL-01     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3721775..3732908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7R46_RS17705 (BE1S18E01_34300) - 3722035..3722241 (-) 207 WP_039766350.1 hypothetical protein -
  H7R46_RS17710 (BE1S18E01_34310) - 3722291..3724405 (-) 2115 WP_086260872.1 TonB-dependent copper receptor -
  H7R46_RS17715 (BE1S18E01_34320) - 3724478..3724903 (-) 426 WP_086260871.1 DUF2946 family protein -
  H7R46_RS17720 (BE1S18E01_34330) def 3724947..3725477 (-) 531 WP_086260870.1 peptide deformylase -
  H7R46_RS17725 (BE1S18E01_34340) tsaP 3725600..3726754 (+) 1155 WP_086260869.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  H7R46_RS17730 (BE1S18E01_34350) dprA 3726775..3727908 (+) 1134 WP_086260876.1 DNA-processing protein DprA Machinery gene
  H7R46_RS17735 (BE1S18E01_34360) - 3727960..3728529 (+) 570 WP_002114056.1 L-threonylcarbamoyladenylate synthase -
  H7R46_RS17740 (BE1S18E01_34370) - 3728922..3729842 (-) 921 WP_002114137.1 DMT family transporter -
  H7R46_RS17745 (BE1S18E01_34380) - 3729947..3730600 (-) 654 WP_079380979.1 TetR/AcrR family transcriptional regulator -
  H7R46_RS17750 (BE1S18E01_34390) - 3730736..3731950 (+) 1215 WP_086260868.1 MFS transporter -
  H7R46_RS17755 (BE1S18E01_34400) - 3731972..3732736 (+) 765 WP_002114047.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 41876.42 Da        Isoelectric Point: 6.6297

>NTDB_id=77665 H7R46_RS17730 WP_086260876.1 3726775..3727908(+) (dprA) [Acinetobacter sp. BEC1-S18-ESBL-01]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIVDYFGSCEKAIQPAGLSQWRNLGLHANHLKRVDEFQTAQGQAQFEKLTEQI
RQYTDFILTADDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDSTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQQNSTEEAVVSSTPEI
PEHLINLYQSLDWVGQNIDQLVLHHSQPVAELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=77665 H7R46_RS17730 WP_086260876.1 3726775..3727908(+) (dprA) [Acinetobacter sp. BEC1-S18-ESBL-01]
ATGCTTACTCAACTTTCTTCACACCATTACCACACGCTTAAAGTGTGGTATTTGGTGCAACACTCTTTAGTCAGCTTTAA
AAAAATTGTCGATTATTTTGGTAGCTGTGAAAAGGCGATCCAACCTGCTGGATTATCTCAATGGCGCAATCTCGGGTTAC
ATGCTAATCATTTAAAACGCGTAGATGAATTTCAAACTGCTCAGGGTCAAGCTCAGTTTGAAAAATTAACTGAGCAGATC
CGGCAATATACCGACTTTATTTTAACGGCAGATGACTCAGGCTATCCCACTCAGTTATTACCTTATACAGATCACCCACC
TATCATTTTTGGAAAAGGTCAGGCACAAGCCTTATTACAACCACAAATTGCGATTGTAGGTAGCCGAAAACCAAGCCCAC
ATGGTCGTCAGGTTGCTTATGATTTTGCCTATTACTTAAGTGAAAAAGGTTTTTATGTGAGTAGTGGCTTGGCATATGGC
ATTGATGAAGCTGCTCACCAAGGAGCATCAGCACATCAACGTACAATTGCAGTAACAGGAACTGGTTTAGACAGTACCTA
CCCTGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAACGGCGCGATTATTACTGAGTTTTTGCCTGGGACAC
CTCCACTACAACAGCATTTCCCACGTAGAAACCGAATTGTTAGCGGTTTGAGTTTAGGCGTGTTAGTGGTAGAAGCTACC
TTAAAAAGTGGTTCTCTCATCACTGCGAACAAAGCTGCCGAACAAGGTAAGACTGTATTTGCCATTCCTGGTCATATTTA
CAGTGAGTTTCATCAAGGTTGCCATCAACTTATTCGTGAGGGAGCAATTTTAGTCGATCATCCTGAACAAATTATTGAAG
ACCTTGCTTTACCCACTCAGTGGCAAAGTCAGCAACAAAACTCCACCGAGGAGGCTGTAGTTTCTAGTACCCCAGAAATT
CCTGAGCATTTAATTAACCTTTATCAATCTTTAGACTGGGTCGGACAAAATATTGATCAGCTTGTCTTACATCACTCTCA
GCCTGTTGCAGAACTCACCTCTTCACTGATGGAACTAGAACTACTTGGTTTATGTATGCAACAATCAGGATTGTATTTAC
GTTGTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

91.512

100

0.915

  dprA Acinetobacter baumannii strain A118

90.981

100

0.91

  dprA Acinetobacter baylyi ADP1

71.129

100

0.719

  dprA Vibrio cholerae strain A1552

44.012

88.594

0.39


Multiple sequence alignment