Detailed information NTG0773557

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: QSJ13_RS17315
• Genome accession: NZ_CP128372
• Coordinates: 3597117..3598235 (-)
• Length: 372 a.a.
• NCBI ID: WP_000347035.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain XH2146
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3592117..3603235

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QSJ13_RS17285 (QSJ13_17305)	-	3592946..3593794 (+)	849	WP_000336551.1	class II glutamine amidotransferase	-
QSJ13_RS17290 (QSJ13_17310)	-	3594047..3594502 (+)	456	WP_000782976.1	bacteriohemerythrin	-
QSJ13_RS17295 (QSJ13_17315)	-	3594655..3595722 (+)	1068	WP_005120426.1	hypothetical protein	-
QSJ13_RS17300 (QSJ13_17320)	-	3595722..3596045 (+)	324	WP_000442585.1	RnfH family protein	-
QSJ13_RS17305 (QSJ13_17325)	bamE	3596100..3596498 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
QSJ13_RS17310 (QSJ13_17330)	fur	3596610..3597047 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
QSJ13_RS17315 (QSJ13_17335)	pilU	3597117..3598235 (-)	1119	WP_000347035.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
QSJ13_RS17320 (QSJ13_17340)	pilT	3598263..3599300 (-)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
QSJ13_RS17325 (QSJ13_17345)	-	3599427..3600119 (+)	693	WP_001108510.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41821.98 Da
• Isoelectric Point: 6.5675

>NTDB_id=773557 QSJ13_RS17315 WP_000347035.1 3597117..3598235(-) (pilU) [Acinetobacter baumannii strain XH2146]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRKEFADTRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDSQ

Nucleotide

• Length: 1119 bp

>NTDB_id=773557 QSJ13_RS17315 WP_000347035.1 3597117..3598235(-) (pilU) [Acinetobacter baumannii strain XH2146]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAGAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAATGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTATTACATTCCA
TCATGAGCGAAAAACAACGCAAAGAATTTGCAGACACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGCCAGCTTTATATGGACTTGTCACTTAACTTAAAGGCTATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGAAAACAGCATTTAACTTTTGACAGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (34-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.661	100	0.769
pilU	Pseudomonas stutzeri DSM 10701	68.817	100	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.908	93.011	0.39