Detailed information NTG0773199

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: QSG85_RS13515
• Genome accession: NZ_CP127906
• Coordinates: 2911058..2912176 (+)
• Length: 372 a.a.
• NCBI ID: WP_317002319.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain SAAb472
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2906058..2917176

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QSG85_RS13505 (QSG85_13510)	-	2909174..2909866 (-)	693	WP_317002318.1	YggS family pyridoxal phosphate-dependent enzyme	-
QSG85_RS13510 (QSG85_13515)	pilT	2909993..2911030 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
QSG85_RS13515 (QSG85_13520)	pilU	2911058..2912176 (+)	1119	WP_317002319.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
QSG85_RS13520 (QSG85_13525)	fur	2912246..2912683 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
QSG85_RS13525 (QSG85_13530)	-	2912795..2913193 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
QSG85_RS13530 (QSG85_13535)	-	2913248..2913571 (-)	324	WP_000442589.1	RnfH family protein	-
QSG85_RS13535 (QSG85_13540)	-	2913571..2914638 (-)	1068	WP_002084046.1	hypothetical protein	-
QSG85_RS13540 (QSG85_13545)	-	2914791..2915246 (-)	456	WP_000782976.1	bacteriohemerythrin	-
QSG85_RS13545 (QSG85_13550)	-	2915499..2916347 (-)	849	WP_000336554.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 42004.25 Da
• Isoelectric Point: 6.8291

>NTDB_id=773199 QSG85_RS13515 WP_317002319.1 2911058..2912176(+) (pilU) [Acinetobacter baumannii strain SAAb472]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSREVIGQLLHSIMSEKQRKEFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=773199 QSG85_RS13515 WP_317002319.1 2911058..2912176(+) (pilU) [Acinetobacter baumannii strain SAAb472]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTAGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAAAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCAGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTCGTAGGCGCGACAG
GCACAGGTAAATCTACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAATTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGCTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGATCGTCATAGCCAGCTTTATATGGACTTGTCACTTAACTTAAAGGCTATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAGGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGAAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (12-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.661	100	0.769
pilU	Pseudomonas stutzeri DSM 10701	69.293	98.925	0.685
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.197	93.011	0.392