Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   H7R41_RS03195 Genome accession   NZ_AP022238
Coordinates   666421..670938 (+) Length   1505 a.a.
NCBI ID   WP_009519764.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain WP8-W18-ESBL-11     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 661421..675938
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7R41_RS03170 (WP8W18E11_06060) - 661862..662500 (-) 639 WP_002027721.1 hypothetical protein -
  H7R41_RS03175 (WP8W18E11_06070) pilG 662783..663166 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  H7R41_RS03180 (WP8W18E11_06080) - 663190..663552 (+) 363 WP_000101096.1 PleD family two-component system response regulator -
  H7R41_RS03185 (WP8W18E11_06090) - 663613..664149 (+) 537 WP_000729762.1 chemotaxis protein CheW -
  H7R41_RS03190 (WP8W18E11_06100) - 664196..666274 (+) 2079 WP_000505929.1 methyl-accepting chemotaxis protein -
  H7R41_RS03195 (WP8W18E11_06110) chpA 666421..670938 (+) 4518 WP_009519764.1 Hpt domain-containing protein Regulator
  H7R41_RS03200 (WP8W18E11_06120) - 670935..671399 (+) 465 WP_009519786.1 hypothetical protein -
  H7R41_RS03205 (WP8W18E11_06130) - 671631..672512 (+) 882 WP_009519710.1 alpha/beta fold hydrolase -
  H7R41_RS03210 (WP8W18E11_06140) dapE 672650..673783 (-) 1134 WP_001016580.1 succinyl-diaminopimelate desuccinylase -
  H7R41_RS03215 (WP8W18E11_06150) - 673909..674052 (-) 144 WP_001984826.1 entericidin A/B family lipoprotein -
  H7R41_RS03220 (WP8W18E11_06160) - 674151..675059 (-) 909 WP_001017523.1 DUF1853 family protein -
  H7R41_RS03225 (WP8W18E11_06170) - 675164..675532 (+) 369 WP_001259501.1 YbaN family protein -

Sequence


Protein


Download         Length: 1505 a.a.        Molecular weight: 171616.67 Da        Isoelectric Point: 4.3032

>NTDB_id=77302 H7R41_RS03195 WP_009519764.1 666421..670938(+) (chpA) [Acinetobacter baumannii strain WP8-W18-ESBL-11]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFIEEIEEIFVDLQPLINKWMQSENIATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLQLTPTIQSYVQLVFKFYFLKLVDNFKQKRAHTLDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETVTGLELDYIEQDSLAEPIIQDTHTEIEINLDETLTLFMEEAEEHLATIHQFLDQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSHSEEILLLQEYREFVRDSLELLSRYSSSEQLEARLQQFNQSWDAYVEQ
HGDRTDPLMPSHGLVSQLLQLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYEV
LLDKPALLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGVVKQHQSILEELKLYTQYTPDISNDLPQQDSTSFEPIYNIEQ
EPEVVATVENFSDSADWAVLGQSVQQDRQYISSTQVNQNFDADLLDIFLEEAEELLEGIDTDLNIWVGEQENFAALNNLM
RYLHTLKGGANMVQATYLGLIAHELESIYERLIQKQLVATSDLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRA
GQNSNFQPLPVVEAFDAESEVFSEQEVISEIIDEIPVELEPALAKLETHHDQVFDTAVTELATPVEVITSVTSQENEVVA
DEQDIEAVVEQTFLEEATELLEMAESLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLEAVQAIAYQLENAFEQFALH
HFNSNIYDHLLESAIAWLKDAIFNHNYQHFDGLQQSLENIQFFETTIQIPTKLTRADLFSSEPVMTFIQGDGTEPPPMMG
AWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFSHTLVEMELAIQRLADQLRRMEGELETQIIAKHG
IEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSDKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLLPR
LQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRAQRQQANKPETGRIELNIQRQGTDVV
VVFSDDGQGIDVEKVRQKALLAGLIKPEQDLEQQDILQLIFHPGLSTAEQVTQISGRGVGLDVVQSDIKSLGGHVSVESV
YGQGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIERIIRVSPASLEQYFESPQELFEYENKRYPLRYLSEFVGNQPI
PRLNGVMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTQ
RHKQLSEAVYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEV
LNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVASESEVKS

Nucleotide


Download         Length: 4518 bp        

>NTDB_id=77302 H7R41_RS03195 WP_009519764.1 666421..670938(+) (chpA) [Acinetobacter baumannii strain WP8-W18-ESBL-11]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATCTTCATTGAAGAAATTGAAGAGATTTTTGTTGATTTGCAACCTTTGATAAATAAATGGATGCAGTCTGAGAATA
TTGCTACGCTCACTGAAATTCGTCGTCATTTCCATACCTTAAAAGGTTCCGGAAGAATGATTGGCGCTAAATCTTCAGCT
GAGCTTGCGTGGACAGTCGAAGATACACTCAACCGGGTAATCAACCAAAGCTTACAATTAACGCCAACTATTCAGAGCTA
TGTGCAGTTAGTATTTAAGTTCTATTTCCTTAAATTAGTAGATAATTTTAAGCAAAAACGAGCACATACCTTAGATTTCA
GACCTCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAACCAGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACGGCCGAAACAGTGACTGGTCTTGAGCTAGATTATATTGAACAAGATTCGTTAGCCGAGCCAATCATTCA
AGATACACATACTGAAATTGAAATAAATCTAGATGAAACCTTGACCTTATTTATGGAAGAGGCGGAAGAACATTTAGCCA
CGATTCATCAATTTTTGGATCAAGAGTTACATCAGTACGACAGTTATAACGCTTTAATCCGCGCTTTACATACTTTGCGT
GGTAGTTCTGCAATGGCGCAGGTCGAAACAATTTTTGAGGCCAGTACCAAAGTTGAGCATTTATTTAAAATACTACTGCA
AGAAGAGTTATCTTCTCACTCTGAAGAAATTTTATTATTACAAGAATATCGTGAGTTTGTTCGAGATAGCTTGGAACTAC
TATCTAGATATAGTTCAAGTGAACAGCTCGAAGCGAGATTGCAGCAATTTAATCAATCTTGGGATGCATATGTTGAGCAA
CATGGTGACCGAACAGATCCGTTAATGCCTTCTCATGGTTTGGTATCGCAATTATTACAATTAGATGTTTCTGAATTATT
GGATGCAGAATTAGATTTTGAGAAGGGAATTCGTAATGAGTTTCCTGATTACCTTGAACGCCTAAGTGAACAGGCTGATT
TATTACTGCAACATACACATTCTCAAGCAATGCTGGGTTTACATGAATATACCAGCCAACTGAAAGAAAGTTATGAAGTG
CTGCTTGATAAACCTGCTTTATTACAATCAGACTATATATTTGAAATTTATCAAAAAGCGCATCAACAGCTCATTCAATT
ATTTGATGCTTTAGCTGCTGGTCAGCGAGTCGGTGTTGTTAAGCAACATCAAAGTATTTTAGAAGAATTAAAACTTTATA
CGCAGTACACTCCAGACATATCAAATGACCTGCCTCAGCAGGATTCGACATCTTTTGAACCAATATACAATATTGAACAA
GAGCCAGAAGTGGTAGCTACTGTAGAGAATTTCTCAGACTCTGCAGACTGGGCGGTATTAGGTCAAAGTGTGCAGCAAGA
TCGACAATATATTTCATCTACACAAGTGAATCAAAATTTTGATGCTGATCTTTTAGATATCTTTCTTGAGGAAGCTGAAG
AATTACTTGAGGGAATTGATACCGATCTTAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCTCTGAACAACCTAATG
CGTTATTTGCATACCTTGAAAGGGGGAGCAAATATGGTTCAGGCAACGTATCTTGGTTTGATTGCCCATGAATTAGAAAG
CATCTATGAGCGTTTAATTCAAAAGCAATTAGTGGCAACTTCAGATTTAATTGATTTTATTCGTTTGGTTCAAGATGACT
TGGCTGACCGTTTACAAATCATGCGTGAACAACAACTAGATTATGCAGCCCCTTACACAATTAACGCATTAAAACGAGCG
GGTCAAAACTCTAACTTCCAACCTTTACCAGTGGTTGAGGCATTTGATGCTGAAAGTGAGGTATTCTCTGAGCAAGAGGT
GATATCGGAAATAATAGATGAGATACCAGTAGAACTTGAACCTGCTCTTGCAAAGCTAGAAACTCATCACGATCAGGTAT
TCGATACAGCGGTTACCGAGTTAGCTACTCCAGTTGAAGTAATTACCTCGGTTACATCGCAAGAGAATGAAGTTGTAGCT
GATGAACAGGACATTGAGGCTGTTGTTGAACAGACGTTCCTAGAAGAAGCTACTGAATTGTTAGAAATGGCTGAGTCGCT
ATTAAAACAATGGTTTGAACAGCGTACAAACCGTAGTATTTTGCTTCAACTACAAAGAGCCGTGCACAGTTTGAAAGGTG
GTGCACGAATGGTGGGTCTAGAAGCCGTACAAGCAATTGCCTACCAACTAGAAAATGCTTTTGAACAATTTGCGCTGCAT
CACTTCAATTCGAATATTTATGATCATTTATTAGAAAGTGCAATTGCATGGTTAAAAGATGCAATTTTCAACCATAACTA
TCAGCATTTCGATGGATTACAGCAAAGTTTAGAAAATATTCAATTCTTTGAAACTACAATCCAGATTCCGACTAAGTTAA
CTAGAGCGGACTTGTTTAGCTCAGAACCAGTGATGACCTTTATACAAGGTGATGGTACAGAGCCTCCACCAATGATGGGA
GCGTGGGAGCAAACAGAGCGTCTGGATCAGAATAATGAAATGATCCGTGTTTCAGCCGACTTAATCGAGAAAATGATTGA
TTTGTCTGGTGAAAATTCCATTAACCGTTCACGAATTGAAATGGACCTAAGCCAATTTAGCCATACACTGGTTGAAATGG
AGTTGGCGATTCAACGACTTGCCGATCAGTTGCGACGAATGGAAGGTGAGTTAGAAACACAGATTATTGCTAAACATGGA
ATTGAACATTCTCGTTATACTGACTTTGACCCATTAGAGATGGACCAATATTCATCTTTAAATCAATTGTCGAAATCGCT
TGCTGAATCTGCATCGGACTTGGTCGACTTTAAAAATACGTTATCTGACAAAATCAGAGATACCGAAAGTTTGCTTTTAC
AACAATCACGAATTCAAGCGGAAATTCAAGAAGGTTTAATGCGGACACGTTTGGTCCCATTTTCGCGTTTATTGCCGCGT
TTACAACGAATTGTTCGTCAGACGTCTACAGCATTGAATAGACCTGCTGAGCTTTTCGTAAATAATACGGAAGGTGAGTT
GGACCGAAACATTTTAGAACGGTTAGTGACTCCGCTTGAGCATATGCTCAGAAACGCAATTGACCATGGTTTAGAAGACC
GAGCGCAGCGGCAACAAGCAAATAAACCAGAAACAGGGCGTATTGAGCTTAATATTCAGCGTCAAGGTACGGATGTTGTG
GTTGTCTTTAGCGATGATGGTCAAGGTATTGATGTTGAAAAAGTACGTCAGAAAGCACTCCTTGCCGGATTGATCAAGCC
AGAACAAGACTTAGAACAGCAAGACATACTGCAACTCATTTTCCATCCGGGTTTAAGTACAGCAGAGCAAGTCACTCAGA
TTTCCGGGCGTGGTGTAGGTCTTGATGTCGTGCAGAGTGATATTAAGTCTTTGGGGGGACATGTCAGCGTTGAATCCGTC
TATGGGCAGGGAACAACATTTACGATTCGTGTACCGACTACAGTAGCGGTAAGTGATGCCTTAATGGTGAAAGTGGCAGA
TCAACAATTTGCGATTCCACTTGCTCAAATCGAACGAATTATTCGAGTGTCACCAGCCTCTTTAGAGCAGTATTTTGAAA
GTCCTCAAGAACTATTTGAGTATGAAAATAAACGTTATCCATTACGTTATCTTTCAGAATTTGTTGGCAACCAACCCATA
CCACGTCTAAATGGCGTGATGTATTCATTACCTGTGTTAATGATTAAAGCCAATAATGGCCAAACTGTGGCACTACTTGT
TGACCAGTTAATTGGCTCTCGAGCGCAAATTGTAGTGAAACCAATTGGTCAACAGTTCTCTAGCATTGGGGCAATTGCAG
GCGCCACAATTTTAGGTGATGGACAGGTCTGCTTAATTTTAGATGGACAAAATATTGCGCGACAAATTCAGTCAACTCAG
CGTCATAAACAACTTAGTGAAGCAGTATATAGACAACGAGAGTCTGATGAACGCCGTCTCATCATGATTGTAGATGACTC
AGTAACTGTGCGTAAGGTCACGTCCCGATTACTTGAACGCCAAGGCTATGATGTGGTTACGGCTAAAGATGGTGTTGACG
CCATAGAGCAGCTAGAAAATATTAAGCCAGATTTGATGCTACTTGATATTGAAATGCCACGTATGGATGGTTTTGAGGTT
CTCAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACTTCCAGAACAGGCGAAAAACATCG
TGAACGAGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCTTTCCAGGAAGAAGAGTTACTAGAGAATATCGATG
CTTTACTTGTAGCGTCTGAAAGTGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

98.938

100

0.99


Multiple sequence alignment