Detailed information NTG0772885

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: QRS93_RS00300
• Genome accession: NZ_CP127842
• Coordinates: 52541..53539 (+)
• Length: 332 a.a.
• NCBI ID: WP_015057190.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain TPCH-F37
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 47541..58539

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRS93_RS00280 (QRS93_00280)	purB	48635..49927 (+)	1293	WP_148848402.1	adenylosuccinate lyase	-
QRS93_RS00285 (QRS93_00285)	comR	50069..50980 (+)	912	WP_015016522.1	XRE family transcriptional regulator	Regulator
QRS93_RS00290 (QRS93_00290)	comS	51067..51162 (+)	96	WP_198455558.1	quorum-sensing system DWW-type pheromone	Regulator
QRS93_RS00295 (QRS93_00295)	-	51266..52399 (+)	1134	WP_042358021.1	ISAs1-like element IS1548 family transposase	-
QRS93_RS00300 (QRS93_00300)	ruvB	52541..53539 (+)	999	WP_015057190.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
QRS93_RS00305 (QRS93_00305)	-	53674..54105 (+)	432	WP_003059365.1	low molecular weight protein-tyrosine-phosphatase	-
QRS93_RS00310 (QRS93_00310)	-	54134..54535 (+)	402	WP_003049089.1	MORN repeat-containing protein	-
QRS93_RS00315 (QRS93_00315)	-	54532..56307 (+)	1776	WP_003059359.1	acyltransferase family protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37274.73 Da
• Isoelectric Point: 4.5556

>NTDB_id=772885 QRS93_RS00300 WP_015057190.1 52541..53539(+) (ruvB) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-F37]
MARILDNDVMGDEELVERTLRPQYLREYIGQDKVKEQLTIFIEAAKLRDESLDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAIEKAGDLVAILNDLEPGDVLFIDEIHRLPMAVEEVLYSAMEDFYIDIMIGAGDTSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYQEADLTEIVERTADIFDMEIVHEAAQELACRSRGTPRIANRLLKRVRDYAQIVGDGVIT
AQITDKALTMLDVDREGLDYVDQKILRTMIEMYQGGPVGLGTLSVNIAEERDTVEDMYEPYLIQKGFLMRTRTGRVATEK
AYRHLGYPYPSK

Nucleotide

• Length: 999 bp

>NTDB_id=772885 QRS93_RS00300 WP_015057190.1 52541..53539(+) (ruvB) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-F37]
ATGGCTAGAATTTTAGATAATGATGTAATGGGGGATGAAGAACTTGTTGAGCGAACGCTTCGTCCGCAGTATTTACGTGA
GTACATTGGGCAAGATAAGGTTAAGGAACAATTAACCATTTTTATTGAAGCGGCTAAGCTCCGTGATGAATCTTTAGATC
ATGTGTTGTTGTTTGGCCCTCCAGGTTTAGGGAAAACCACAATGGCATTTGTGATTGCTAATGAATTAGGGGTTAACTTG
AAGCAAACTTCAGGACCAGCGATTGAGAAGGCTGGTGATTTGGTAGCTATTTTGAATGATCTGGAACCAGGAGATGTGCT
CTTTATTGATGAAATTCATCGTCTGCCTATGGCAGTCGAAGAAGTATTGTACAGTGCTATGGAAGATTTTTACATCGACA
TTATGATTGGTGCTGGGGACACTAGTCGAAGTGTTCATTTGGATTTGCCACCTTTTACATTGATTGGAGCTACAACACGA
GCTGGGATGTTATCAAATCCTTTGCGAGCTCGATTTGGCATTACTGGACACATGGAGTATTATCAGGAAGCTGATTTGAC
TGAAATTGTCGAACGAACAGCCGATATTTTTGACATGGAAATTGTTCACGAAGCGGCTCAAGAGTTAGCTTGCCGTAGTC
GGGGAACACCGCGTATTGCTAATAGATTGTTAAAGCGGGTACGTGATTATGCTCAGATTGTTGGAGATGGCGTCATCACG
GCTCAGATTACAGACAAAGCCCTAACCATGCTTGATGTTGATCGAGAAGGTCTTGATTATGTAGATCAGAAGATTTTACG
CACCATGATTGAAATGTATCAGGGTGGACCTGTTGGGTTAGGCACTTTATCAGTTAATATTGCAGAAGAACGTGATACAG
TTGAAGACATGTACGAACCTTATCTGATTCAAAAAGGATTTCTAATGCGTACACGAACTGGTCGTGTGGCGACGGAAAAA
GCCTATCGTCATCTTGGTTATCCATATCCGTCTAAGTAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	89.759	100	0.898
ruvB	Streptococcus pneumoniae R6	89.458	100	0.895
ruvB	Streptococcus pneumoniae D39	89.458	100	0.895
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.061	98.795	0.593
ruvB	Helicobacter pylori 26695	50.613	98.193	0.497
ruvB	Synechocystis sp. PCC 6803	50	95.783	0.479