Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | PDI59_RS14305 | Genome accession | NZ_CP115478 |
| Coordinates | 2864396..2864866 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain HP20814-062 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2859396..2869866
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PDI59_RS14265 (PDI59_14265) | - | 2859408..2859731 (+) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| PDI59_RS14270 (PDI59_14270) | - | 2859728..2859889 (+) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| PDI59_RS14275 (PDI59_14275) | - | 2859984..2860286 (+) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| PDI59_RS14280 (PDI59_14280) | - | 2860291..2860551 (+) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| PDI59_RS14285 (PDI59_14285) | - | 2860560..2860823 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| PDI59_RS14290 (PDI59_14290) | - | 2860832..2862775 (+) | 1944 | WP_000700554.1 | AAA family ATPase | - |
| PDI59_RS14295 (PDI59_14295) | - | 2862777..2863697 (+) | 921 | WP_000180600.1 | recombinase RecT | - |
| PDI59_RS14300 (PDI59_14300) | - | 2863778..2864395 (+) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| PDI59_RS14305 (PDI59_14305) | ssbA | 2864396..2864866 (+) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| PDI59_RS14310 (PDI59_14310) | - | 2864896..2865789 (+) | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| PDI59_RS14315 (PDI59_14315) | - | 2865796..2866014 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| PDI59_RS14320 (PDI59_14320) | - | 2866023..2866427 (+) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PDI59_RS14325 (PDI59_14325) | - | 2866440..2866811 (+) | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| PDI59_RS14330 (PDI59_14330) | - | 2866811..2867068 (+) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| PDI59_RS14335 (PDI59_14335) | - | 2867065..2867313 (+) | 249 | WP_000178987.1 | SAV1978 family virulence-associated passenger protein | - |
| PDI59_RS14340 (PDI59_14340) | - | 2867328..2867573 (+) | 246 | WP_001065108.1 | DUF1024 family protein | - |
| PDI59_RS14345 (PDI59_14345) | - | 2867570..2868106 (+) | 537 | WP_000185693.1 | dUTPase | - |
| PDI59_RS14350 (PDI59_14350) | - | 2868143..2868388 (+) | 246 | WP_001282077.1 | hypothetical protein | - |
| PDI59_RS14355 (PDI59_14355) | - | 2868385..2868591 (+) | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| PDI59_RS14360 (PDI59_14360) | - | 2868588..2868737 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| PDI59_RS14365 (PDI59_14365) | - | 2868737..2868937 (+) | 201 | WP_001557462.1 | DUF1514 family protein | - |
| PDI59_RS14370 (PDI59_14370) | - | 2868965..2869381 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=772461 PDI59_RS14305 WP_000934759.1 2864396..2864866(+) (ssbA) [Staphylococcus aureus strain HP20814-062]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=772461 PDI59_RS14305 WP_000934759.1 2864396..2864866(+) (ssbA) [Staphylococcus aureus strain HP20814-062]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |