Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | PDI56_RS14325 | Genome accession | NZ_CP115473 |
| Coordinates | 2854686..2855156 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain AF4004 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2849686..2860156
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PDI56_RS14285 (PDI56_14285) | - | 2849698..2850021 (+) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| PDI56_RS14290 (PDI56_14290) | - | 2850018..2850179 (+) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| PDI56_RS14295 (PDI56_14295) | - | 2850274..2850576 (+) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| PDI56_RS14300 (PDI56_14300) | - | 2850581..2850841 (+) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| PDI56_RS14305 (PDI56_14305) | - | 2850850..2851113 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| PDI56_RS14310 (PDI56_14310) | - | 2851122..2853065 (+) | 1944 | WP_000700554.1 | AAA family ATPase | - |
| PDI56_RS14315 (PDI56_14315) | - | 2853067..2853987 (+) | 921 | WP_000180600.1 | recombinase RecT | - |
| PDI56_RS14320 (PDI56_14320) | - | 2854068..2854685 (+) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| PDI56_RS14325 (PDI56_14325) | ssbA | 2854686..2855156 (+) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| PDI56_RS14330 (PDI56_14330) | - | 2855186..2856079 (+) | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| PDI56_RS14335 (PDI56_14335) | - | 2856086..2856304 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| PDI56_RS14340 (PDI56_14340) | - | 2856313..2856717 (+) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PDI56_RS14345 (PDI56_14345) | - | 2856730..2857101 (+) | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| PDI56_RS14350 (PDI56_14350) | - | 2857101..2857358 (+) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| PDI56_RS14355 (PDI56_14355) | - | 2857355..2857603 (+) | 249 | WP_000178987.1 | SAV1978 family virulence-associated passenger protein | - |
| PDI56_RS14360 (PDI56_14360) | - | 2857618..2857863 (+) | 246 | WP_001065108.1 | DUF1024 family protein | - |
| PDI56_RS14365 (PDI56_14365) | - | 2857860..2858396 (+) | 537 | WP_000185693.1 | dUTPase | - |
| PDI56_RS14370 (PDI56_14370) | - | 2858433..2858678 (+) | 246 | WP_001282077.1 | hypothetical protein | - |
| PDI56_RS14375 (PDI56_14375) | - | 2858675..2858881 (+) | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| PDI56_RS14380 (PDI56_14380) | - | 2858878..2859027 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| PDI56_RS14385 (PDI56_14385) | - | 2859027..2859227 (+) | 201 | WP_001557462.1 | DUF1514 family protein | - |
| PDI56_RS14390 (PDI56_14390) | - | 2859255..2859671 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=772287 PDI56_RS14325 WP_000934759.1 2854686..2855156(+) (ssbA) [Staphylococcus aureus strain AF4004]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=772287 PDI56_RS14325 WP_000934759.1 2854686..2855156(+) (ssbA) [Staphylococcus aureus strain AF4004]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |