Detailed information NTG0771387

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: QOM21_RS24380
• Genome accession: NZ_CP127172
• Coordinates: 5563974..5565260 (+)
• Length: 428 a.a.
• NCBI ID: WP_407553169.1
• Uniprot ID: -
• Organism: Streptomyces sp. Pv4-95 voucher LV 740
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5558974..5570260

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOM21_RS24340 (QOM21_24345)	-	5559011..5559205 (+)	195	WP_393895537.1	hypothetical protein	-
QOM21_RS24345 (QOM21_24350)	-	5559202..5559582 (-)	381	WP_407553166.1	arsenate reductase family protein	-
QOM21_RS24350 (QOM21_24355)	-	5559723..5560088 (+)	366	WP_407553167.1	hypothetical protein	-
QOM21_RS24365 (QOM21_24370)	tig	5560789..5562177 (+)	1389	WP_407553168.1	trigger factor	-
QOM21_RS24370 (QOM21_24375)	clpP	5562469..5563071 (+)	603	WP_407555782.1	ATP-dependent Clp protease proteolytic subunit	Regulator
QOM21_RS24375 (QOM21_24380)	clpP	5563139..5563816 (+)	678	WP_393895571.1	ATP-dependent Clp protease proteolytic subunit	Regulator
QOM21_RS24380 (QOM21_24385)	clpX	5563974..5565260 (+)	1287	WP_407553169.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
QOM21_RS24385 (QOM21_24390)	-	5565456..5566427 (-)	972	WP_407553170.1	hypothetical protein	-
QOM21_RS24390 (QOM21_24395)	-	5566567..5569188 (+)	2622	WP_407553171.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46847.61 Da
• Isoelectric Point: 4.8294

>NTDB_id=771387 QOM21_RS24380 WP_407553169.1 5563974..5565260(+) (clpX) [Streptomyces sp. Pv4-95 voucher LV 740]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLNGYVVGQEP
AKKTLSVAVYNHYKRVQAGENGGGRGDEGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAFADATALTEAGYVGEDV
ENILLKLIQAADFDIKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQI
DTTNVLFIVGGAFAGLEKIIESRSGAKGIGFGATIRSKREIESKDQLQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDRE
ALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLMSVMYEVPSRKDVARVVITE
DVVHSNVNPTLVPRTRNGESGEPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=771387 QOM21_RS24380 WP_407553169.1 5563974..5565260(+) (clpX) [Streptomyces sp. Pv4-95 voucher LV 740]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCTGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAAATCATCGAGGAGGAACTCGCCGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAACCGCGGGAGATCTACGAGTTCCTGAACGGCTACGTCGTCGGCCAGGAGCCC
GCCAAGAAGACGCTCTCGGTCGCCGTGTACAACCACTACAAGCGGGTGCAGGCCGGCGAGAACGGCGGTGGCCGCGGCGA
CGAGGGCATCGAGCTCGCCAAGTCCAACATCCTGCTGCTCGGCCCGACCGGCTCGGGCAAGACGCTGCTGGCGCAGACTC
TCGCCCGGATGCTCAACGTCCCCTTCGCCTTCGCCGACGCCACGGCGCTGACCGAGGCCGGCTATGTCGGCGAGGACGTC
GAGAACATCCTCCTCAAGCTGATCCAGGCCGCGGACTTCGACATCAAGAAGGCCGAGACCGGCATCATCTACATCGACGA
GATCGACAAGGTCGCCCGGAAGAGCGAGAACCCGTCGATCACGCGTGACGTCTCCGGCGAGGGCGTGCAGCAGGCCCTGC
TGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAATTCATCCAGATC
GACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGCTCCGGGGCCAA
GGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATCGAGTCCAAGGACCAGCTCCAGGAGGTCATGCCGGAGG
ACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTCCCGGTCCTCACCTCCGTCCACAACCTCGACCGTGAG
GCCCTGCTGCAGATCCTGGTCGAGCCGCGCAACGCGCTCGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGTGGA
GCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCCCGTGGTCTGCGCG
CCATCATGGAAGAAGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACCGAG
GACGTGGTGCACTCCAACGTCAACCCGACGCTGGTGCCCCGCACCCGCAACGGTGAGTCGGGCGAGCCCCACGAGAAGAG
CGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-394)

• AAA domain (Cdc48 subfamily) (AAA_2) (114-310)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.594	93.692	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.415	95.794	0.512