Detailed information NTG0769486

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: F6I26_RS00410
• Genome accession: NZ_CP126961
• Coordinates: 65112..66110 (+)
• Length: 332 a.a.
• NCBI ID: WP_024052878.1
• Uniprot ID: A0A413KQI3
• Organism: Streptococcus anginosus strain UMB4708
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 60112..71110

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F6I26_RS00385 (F6I26_000385)	-	60276..61103 (+)	828	WP_003036938.1	PTS system mannose/fructose/sorbose family transporter subunit IID	-
F6I26_RS00390 (F6I26_000390)	-	61121..61525 (+)	405	WP_024052882.1	PTS sugar transporter subunit IIA	-
F6I26_RS00395 (F6I26_000395)	-	61692..62861 (+)	1170	WP_024052881.1	SIS domain-containing protein	-
F6I26_RS00400 (F6I26_000400)	lacD	62872..63873 (+)	1002	WP_024052880.1	tagatose-bisphosphate aldolase	-
F6I26_RS00405 (F6I26_000405)	-	63916..64953 (+)	1038	WP_024052879.1	aldose epimerase family protein	-
F6I26_RS00410 (F6I26_000410)	ruvB	65112..66110 (+)	999	WP_024052878.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
F6I26_RS00415 (F6I26_000415)	-	66112..66675 (+)	564	WP_024052877.1	nucleotidyltransferase family protein	-
F6I26_RS00420 (F6I26_000420)	-	66912..67340 (+)	429	WP_024052876.1	low molecular weight protein-tyrosine-phosphatase	-
F6I26_RS00425 (F6I26_000425)	-	67349..67762 (+)	414	WP_024052875.1	MORN repeat-containing protein	-
F6I26_RS00430 (F6I26_000430)	-	67752..69569 (+)	1818	WP_150888124.1	acyltransferase family protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37310.66 Da
• Isoelectric Point: 4.3629

>NTDB_id=769486 F6I26_RS00410 WP_024052878.1 65112..66110(+) (ruvB) [Streptococcus anginosus strain UMB4708]
MSRILDNELMGDEELVERTLRPQYLQEYIGQDKVKNQLKIFIEAAKMRDEALDHTLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPVVEKAGDLVAILNDLEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGSGETGRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAEADLTEIVERTADIFEMEITHEAAEELALRSRGTPRIANRLLKRVRDFAQIMGNGLID
DQITDQALTMLDVDQEGLDYVDQKILKTMIEVYGGGPVGLGTLSINIAEEQETVEDMYEPYLIQKGFVMRTRTGRVATRK
AYEHLGYEYLEK

Nucleotide

• Length: 999 bp

>NTDB_id=769486 F6I26_RS00410 WP_024052878.1 65112..66110(+) (ruvB) [Streptococcus anginosus strain UMB4708]
ATGAGTAGAATTTTGGATAATGAATTGATGGGAGACGAGGAGCTCGTAGAGCGCACATTGCGTCCCCAGTATTTACAAGA
ATATATTGGGCAAGACAAGGTCAAAAATCAGCTGAAAATTTTCATTGAGGCAGCTAAAATGCGAGATGAAGCGCTAGATC
ACACGTTGCTTTTTGGACCTCCAGGGTTGGGAAAAACCACTATGGCTTTTGTCATTGCCAATGAACTGGGAGTCAATCTC
AAGCAAACTTCGGGTCCAGTTGTTGAGAAAGCGGGCGATTTGGTGGCAATCTTGAACGATTTGGAGCCGGGAGATGTTCT
CTTTATTGATGAGATTCACCGCTTGCCTATGTCTGTTGAAGAGGTGCTCTATAGCGCTATGGAGGACTTTTACATTGATA
TTATGATTGGCTCTGGCGAGACCGGTCGTAGTGTTCACTTGGATTTGCCACCGTTTACCTTGATTGGCGCTACGACCAGA
GCTGGTATGCTGTCCAATCCTTTACGGGCTCGTTTTGGCATTACTGGTCACATGGAATATTATGCAGAAGCAGATTTGAC
GGAGATTGTGGAGCGGACGGCAGACATCTTTGAAATGGAGATTACGCATGAAGCAGCTGAAGAATTAGCTCTGCGTAGCC
GAGGCACGCCTCGGATTGCCAATCGGCTTCTTAAACGTGTACGAGATTTTGCTCAGATTATGGGCAACGGACTAATTGAT
GACCAAATTACTGATCAAGCCCTGACGATGCTGGATGTGGATCAGGAAGGTCTAGATTATGTGGATCAGAAGATTCTCAA
GACCATGATTGAAGTGTATGGTGGCGGGCCAGTTGGTCTGGGGACTCTGTCTATCAATATCGCAGAAGAGCAAGAAACGG
TCGAAGATATGTATGAGCCTTATTTGATCCAGAAAGGCTTTGTTATGCGAACTCGAACAGGGCGCGTGGCAACCCGTAAG
GCTTACGAGCATTTGGGTTATGAATATTTGGAGAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

3D structure

• AlphaFold DB: A0A413KQI3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	92.47	100	0.925
ruvB	Streptococcus pneumoniae R6	92.169	100	0.922
ruvB	Streptococcus pneumoniae D39	92.169	100	0.922
ruvB	Bacillus subtilis subsp. subtilis str. 168	59.816	98.193	0.587
ruvB	Helicobacter pylori 26695	51.084	97.289	0.497
ruvB	Synechocystis sp. PCC 6803	50.323	93.373	0.47