Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   ORQ91_RS07640 Genome accession   NZ_CP115172
Coordinates   1507254..1507547 (+) Length   97 a.a.
NCBI ID   WP_024422977.1    Uniprot ID   A0A0M2EIN6
Organism   Bacillus safensis strain BS-10L     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1502254..1512547
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORQ91_RS07605 (ORQ91_01525) - 1502348..1502986 (+) 639 WP_024422981.1 MBL fold metallo-hydrolase -
  ORQ91_RS07610 (ORQ91_01526) - 1503034..1503276 (-) 243 WP_003217440.1 DUF2626 domain-containing protein -
  ORQ91_RS07615 (ORQ91_01527) - 1503489..1503869 (+) 381 WP_007501232.1 Spx/MgsR family RNA polymerase-binding regulatory protein -
  ORQ91_RS07625 (ORQ91_01529) - 1504093..1504968 (+) 876 WP_024422979.1 STAS domain-containing protein -
  ORQ91_RS07630 (ORQ91_01530) comGA 1505146..1506216 (+) 1071 WP_041117979.1 competence type IV pilus ATPase ComGA Machinery gene
  ORQ91_RS07635 (ORQ91_01531) comGB 1506197..1507237 (+) 1041 WP_133744199.1 competence type IV pilus assembly protein ComGB -
  ORQ91_RS07640 (ORQ91_01532) comGC 1507254..1507547 (+) 294 WP_024422977.1 competence type IV pilus major pilin ComGC Machinery gene
  ORQ91_RS07645 (ORQ91_01533) comGD 1507540..1507986 (+) 447 WP_133744198.1 competence type IV pilus minor pilin ComGD -
  ORQ91_RS07650 (ORQ91_01534) comGE 1507970..1508284 (+) 315 WP_270127803.1 competence type IV pilus minor pilin ComGE -
  ORQ91_RS07655 (ORQ91_01535) comGF 1508271..1508723 (+) 453 WP_270127805.1 competence type IV pilus minor pilin ComGF -
  ORQ91_RS07660 (ORQ91_01536) - 1508720..1509103 (+) 384 WP_133744195.1 competence type IV pilus minor pilin ComGG -
  ORQ91_RS07665 (ORQ91_01537) - 1509163..1509357 (+) 195 WP_024422974.1 YqzE family protein -
  ORQ91_RS07670 (ORQ91_01538) - 1509392..1509670 (-) 279 WP_171464609.1 DUF3889 domain-containing protein -
  ORQ91_RS07675 (ORQ91_01539) tapA 1509970..1510497 (+) 528 WP_103131952.1 amyloid fiber anchoring/assembly protein TapA -
  ORQ91_RS07680 (ORQ91_01540) sipW 1510550..1511122 (+) 573 WP_024422971.1 signal peptidase I SipW -
  ORQ91_RS07685 (ORQ91_01541) tasA 1511177..1511977 (+) 801 WP_024422970.1 biofilm matrix protein TasA -
  ORQ91_RS07690 (ORQ91_01542) sinR 1512045..1512380 (-) 336 WP_024422969.1 transcriptional regulator SinR Regulator

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10686.62 Da        Isoelectric Point: 7.3218

>NTDB_id=768549 ORQ91_RS07640 WP_024422977.1 1507254..1507547(+) (comGC) [Bacillus safensis strain BS-10L]
MNDKGFTLLEMLIVMLVISILLLITIPNITRHHQAIQAKGCEGLKSMVSTQVMAYELEHDGKTPSLAELEKEGYVKKGLT
CPNGKAIVIQNGNVKHE

Nucleotide


Download         Length: 294 bp        

>NTDB_id=768549 ORQ91_RS07640 WP_024422977.1 1507254..1507547(+) (comGC) [Bacillus safensis strain BS-10L]
ATGAATGATAAAGGATTTACCCTGTTAGAAATGTTAATAGTTATGCTCGTAATATCCATTCTTTTACTCATTACCATACC
GAATATCACACGTCATCACCAAGCGATTCAGGCAAAGGGCTGTGAAGGGCTTAAATCAATGGTCAGCACACAAGTGATGG
CATATGAATTGGAGCATGATGGGAAGACGCCATCTTTAGCTGAATTAGAAAAAGAAGGTTATGTCAAAAAGGGGTTAACT
TGTCCTAATGGAAAAGCGATTGTCATTCAAAACGGCAACGTGAAGCATGAATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M2EIN6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

67.01

100

0.67
  comGC Staphylococcus aureus MW2

42.222

92.784

0.392
  comGC Staphylococcus aureus N315

42.222

92.784

0.392