Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGA   Type   Machinery gene
Locus tag   ORQ91_RS07630 Genome accession   NZ_CP115172
Coordinates   1505146..1506216 (+) Length   356 a.a.
NCBI ID   WP_041117979.1    Uniprot ID   -
Organism   Bacillus safensis strain BS-10L     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1500146..1511216
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORQ91_RS07590 (ORQ91_01522) - 1500348..1501601 (+) 1254 WP_149126475.1 MFS transporter -
  ORQ91_RS07595 (ORQ91_01523) - 1501678..1501992 (+) 315 WP_270127795.1 MTH1187 family thiamine-binding protein -
  ORQ91_RS07600 (ORQ91_01524) - 1502017..1502190 (-) 174 WP_003217333.1 DUF2759 domain-containing protein -
  ORQ91_RS07605 (ORQ91_01525) - 1502348..1502986 (+) 639 WP_024422981.1 MBL fold metallo-hydrolase -
  ORQ91_RS07610 (ORQ91_01526) - 1503034..1503276 (-) 243 WP_003217440.1 DUF2626 domain-containing protein -
  ORQ91_RS07615 (ORQ91_01527) - 1503489..1503869 (+) 381 WP_007501232.1 Spx/MgsR family RNA polymerase-binding regulatory protein -
  ORQ91_RS07625 (ORQ91_01529) - 1504093..1504968 (+) 876 WP_024422979.1 STAS domain-containing protein -
  ORQ91_RS07630 (ORQ91_01530) comGA 1505146..1506216 (+) 1071 WP_041117979.1 competence type IV pilus ATPase ComGA Machinery gene
  ORQ91_RS07635 (ORQ91_01531) comGB 1506197..1507237 (+) 1041 WP_133744199.1 competence type IV pilus assembly protein ComGB -
  ORQ91_RS07640 (ORQ91_01532) comGC 1507254..1507547 (+) 294 WP_024422977.1 competence type IV pilus major pilin ComGC Machinery gene
  ORQ91_RS07645 (ORQ91_01533) comGD 1507540..1507986 (+) 447 WP_133744198.1 competence type IV pilus minor pilin ComGD -
  ORQ91_RS07650 (ORQ91_01534) comGE 1507970..1508284 (+) 315 WP_270127803.1 competence type IV pilus minor pilin ComGE -
  ORQ91_RS07655 (ORQ91_01535) comGF 1508271..1508723 (+) 453 WP_270127805.1 competence type IV pilus minor pilin ComGF -
  ORQ91_RS07660 (ORQ91_01536) - 1508720..1509103 (+) 384 WP_133744195.1 competence type IV pilus minor pilin ComGG -
  ORQ91_RS07665 (ORQ91_01537) - 1509163..1509357 (+) 195 WP_024422974.1 YqzE family protein -
  ORQ91_RS07670 (ORQ91_01538) - 1509392..1509670 (-) 279 WP_171464609.1 DUF3889 domain-containing protein -
  ORQ91_RS07675 (ORQ91_01539) tapA 1509970..1510497 (+) 528 WP_103131952.1 amyloid fiber anchoring/assembly protein TapA -
  ORQ91_RS07680 (ORQ91_01540) sipW 1510550..1511122 (+) 573 WP_024422971.1 signal peptidase I SipW -

Sequence

Protein


Download         Length: 356 a.a.        Molecular weight: 40398.79 Da        Isoelectric Point: 9.4061

>NTDB_id=768548 ORQ91_RS07630 WP_041117979.1 1505146..1506216(+) (comGA) [Bacillus safensis strain BS-10L]
MYGIEYLRQELLEEACRMRASDVHIVPKEKEASVSFRVDSDLIQQRTIDKKSGERLIAHFKFLSSMDIGEKRRPQNGSLA
VMLRNGQVFIRMSTLPTVNDESLVIRILPQDHVPKIKHLSLFPKASARLLSFLNHSHGLILFTGPTNSGKTTTLYSLIQF
AKKNFNRNIITLEDPVETRNEEVLQVQVNEKAGITYAAGLRAILRHDPDVIVLGEIRDAETARTAIRAALTGHLVLSTLH
AKNAKGALYRMLEFGVTMNELEQTMVAIAAQRLIELTCPFCGERCQLYCKLNRPIRRTNVFELLFGKELGECIKEAKGEY
AHSSYETLQRLIRKGVALGYLSKNTYHRWVYEEASL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=768548 ORQ91_RS07630 WP_041117979.1 1505146..1506216(+) (comGA) [Bacillus safensis strain BS-10L]
TTGTATGGGATTGAATATTTAAGGCAAGAGCTGCTAGAAGAAGCATGCCGCATGAGGGCTTCTGATGTGCATATTGTGCC
AAAAGAAAAGGAAGCTTCTGTGTCATTTCGTGTTGACTCAGATTTAATCCAGCAGCGAACGATTGATAAAAAAAGCGGAG
AGAGGCTTATTGCACATTTTAAATTTTTATCTTCTATGGATATCGGGGAAAAAAGGAGACCGCAAAATGGCTCACTAGCT
GTGATGCTAAGAAACGGTCAAGTGTTTATTCGGATGTCTACTTTGCCGACAGTAAATGATGAGAGCTTAGTGATTAGAAT
ATTGCCGCAGGATCATGTTCCGAAAATAAAACATCTATCATTATTTCCGAAAGCCTCAGCCAGATTATTATCCTTTTTAA
ACCACTCGCATGGACTCATTTTATTTACTGGGCCAACAAATTCAGGGAAAACGACAACACTATATTCATTGATCCAGTTT
GCAAAAAAGAATTTTAACCGAAATATTATTACCCTTGAAGATCCTGTCGAAACAAGGAATGAAGAAGTGCTGCAGGTTCA
AGTGAATGAAAAAGCCGGCATCACATATGCCGCAGGATTACGCGCTATTTTAAGACATGATCCAGATGTGATTGTGCTAG
GAGAAATAAGAGATGCTGAAACGGCTAGAACGGCGATTAGAGCAGCACTGACAGGCCATTTAGTATTGAGTACGCTCCAT
GCAAAAAACGCAAAAGGAGCCCTTTATCGTATGCTTGAATTTGGTGTCACGATGAATGAACTTGAGCAAACGATGGTTGC
GATTGCTGCGCAGCGATTAATCGAGCTCACCTGTCCTTTTTGCGGAGAAAGATGTCAGCTTTACTGTAAATTAAATCGAC
CGATCAGACGAACAAATGTATTTGAACTGCTGTTCGGAAAAGAGCTTGGTGAGTGTATCAAGGAGGCTAAAGGAGAATAT
GCTCACTCGTCATATGAAACACTGCAAAGATTAATTCGTAAAGGAGTGGCACTCGGCTATTTATCAAAAAACACTTACCA
TCGCTGGGTTTATGAAGAAGCGAGCCTCTAA

Domains

Predicted by InterproScan.

Type II/IV secretion system protein (T2SSE)

(11-275)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGA Bacillus subtilis subsp. subtilis str. 168

64.689

99.438

0.643