Detailed information NTG0767995

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: OZ430_RS03305
• Genome accession: NZ_CP115039
• Coordinates: 731195..732532 (-)
• Length: 445 a.a.
• NCBI ID: WP_023447174.1
• Uniprot ID: V4Q590
• Organism: Stutzerimonas kunmingensis strain LP1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 726195..737532

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OZ430_RS03295 (OZ430_03295)	-	728248..729843 (-)	1596	WP_312914663.1	PleD family two-component system response regulator	-
OZ430_RS03300 (OZ430_03300)	-	730059..731117 (+)	1059	WP_312914661.1	DUF2333 family protein	-
OZ430_RS03305 (OZ430_03305)	pilR	731195..732532 (-)	1338	WP_023447174.1	sigma-54 dependent transcriptional regulator	Regulator
OZ430_RS03310 (OZ430_03310)	pilS	732657..734249 (-)	1593	WP_041015969.1	PAS domain-containing sensor histidine kinase	Regulator
OZ430_RS03315 (OZ430_03315)	-	734239..734472 (-)	234	WP_014819063.1	PP0621 family protein	-
OZ430_RS03320 (OZ430_03320)	-	734589..735578 (-)	990	WP_014819064.1	outer membrane protein assembly factor BamD	-
OZ430_RS03325 (OZ430_03325)	rluD	735784..736758 (+)	975	WP_044315721.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
OZ430_RS03330 (OZ430_03330)	pgeF	736755..737489 (+)	735	WP_312914659.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49515.01 Da
• Isoelectric Point: 6.4127

>NTDB_id=767995 OZ430_RS03305 WP_023447174.1 731195..732532(-) (pilR) [Stutzerimonas kunmingensis strain LP1]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARECLAREHYDLCLTDMRLPDGSGLELVQYIQQQHPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVGTALRLRAPTAEMPVDSRLLGSSPPMKTLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLAEAM
LRRLAAECGDSSARLHPEALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAGDLRLADSPGVSENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=767995 OZ430_RS03305 WP_023447174.1 731195..732532(-) (pilR) [Stutzerimonas kunmingensis strain LP1]
ATGACCGCGCGCCAAAAAGCACTGATCATCGATGACGAGCCGGATATCCGCGAACTGCTGGAAATCACTCTTGGCCGCAT
GAAACTCGATACCCGCAGCGCTCGCAATCTCAAGGAAGCGCGCGAATGCCTGGCCCGCGAGCATTACGACCTGTGCCTTA
CCGATATGCGTCTGCCCGATGGCAGCGGCCTGGAGCTGGTGCAATACATTCAGCAACAGCACCCGCAACTGCCGGTGGCG
ATGATCACTGCATACGGCAGCCTGGATACCGCCATTGGCGCGCTCAAGGCTGGGGCATTCGACTTTCTCACCAAACCGGT
GGACCTCAACCGCTTGCGCGAGCTGGTCGGCACGGCCCTGCGCCTGAGGGCGCCCACAGCGGAAATGCCGGTGGACAGCC
GCCTGCTCGGCAGCTCGCCACCCATGAAGACCCTTCGCAAGCAGATCGGCAAACTCGCCCGCAGCCAGGCGCCGGTTTAT
ATCAGCGGCGAGTCCGGCAGCGGCAAGGAGCTGGTGGCCCGACTGATTCACGAGCAGGGTCCTCGCAGTGAAAAGCCCTT
TGTGCCTGTCAACTGCGGCGCGATCCCGTCGGAACTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCAGTG
GCGCCATCGAGGACAAGCCCGGGCTATTCCAGGCCGCCAATGGCGGCACGCTGTTCCTCGACGAGGTAGCCGACCTGCCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAGGCTGTACGCGCGGTCGGCGGCGCTCAGGAAGTAATGGT
CGATGTGCGCATCCTCTGCGCCACCCACAAGGACCTCGCCAGCGAAGTGGCCGCAGGCCGTTTCCGCCAGGATCTGTATT
ACCGCTTGAATGTCATCGAACTGCGCGTGCCGCCACTGCGCGAGCGTCGCGAAGACATTGGCCTGCTCGCCGAAGCCATG
CTTCGGCGTCTTGCAGCGGAGTGCGGTGACAGCAGCGCTCGCCTGCACCCGGAGGCTCTGGCCAAGCTGGAAAACTATCG
CTTCCCAGGGAACGTTCGTGAGCTGGAGAACATGCTCGAGCGGGCCTACACACTCTGCGAGGGCGATGAGATCAAGGCGG
GCGATCTACGCTTGGCAGACAGCCCAGGCGTATCGGAGAACGGTGAAGCCAGTCTGGCGCAGATCGACAATCTGGAAGAT
CACCTGGAAGAGATCGAGCGCAAGCTGATCATGCAGGCGCTGGAGGAAACCCGCTGGAACCGCACCGCGGCAGCCCAACG
GCTGGGGCTGACCTTCCGCTCGATGCGTTACCGGCTGAAAAAACTCGGCCTGGACTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Response regulator receiver domain (Response_reg) (8-116)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

3D structure

• AlphaFold DB: V4Q590

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.811	99.775	0.856
pilR	Acinetobacter baumannii strain A118	50.109	100	0.517
luxO	Vibrio cholerae strain A1552	38.031	100	0.382