Detailed information NTG0767363

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: O2T12_RS07590
• Genome accession: NZ_CP114886
• Coordinates: 1774952..1776016 (+)
• Length: 354 a.a.
• NCBI ID: WP_101745016.1
• Uniprot ID: -
• Organism: Endozoicomonas sp. GU-1 strain Ap1-3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1769952..1781016

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O2T12_RS07575 (O2T12_07575)	rpmE	1770541..1770756 (+)	216	WP_101745013.1	50S ribosomal protein L31	-
O2T12_RS07580 (O2T12_07580)	-	1770919..1772175 (+)	1257	WP_269673262.1	malic enzyme-like NAD(P)-binding protein	-
O2T12_RS07585 (O2T12_07585)	-	1772182..1774653 (-)	2472	WP_269673263.1	penicillin-binding protein 1A	-
O2T12_RS07590 (O2T12_07590)	comM	1774952..1776016 (+)	1065	WP_101745016.1	pilus assembly protein PilM	Machinery gene
O2T12_RS07595 (O2T12_07595)	-	1776016..1776579 (+)	564	WP_269673264.1	PilN domain-containing protein	-
O2T12_RS07600 (O2T12_07600)	-	1776576..1777187 (+)	612	WP_269673265.1	type 4a pilus biogenesis protein PilO	-
O2T12_RS07605 (O2T12_07605)	-	1777184..1777720 (+)	537	WP_269673266.1	pilus assembly protein PilP	-
O2T12_RS07610 (O2T12_07610)	pilQ	1777975..1780017 (+)	2043	WP_269673267.1	type IV pilus secretin PilQ family protein	Machinery gene
O2T12_RS07615 (O2T12_07615)	aroK	1780308..1780829 (+)	522	WP_101745020.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38261.65 Da
• Isoelectric Point: 4.2786

>NTDB_id=767363 O2T12_RS07590 WP_101745016.1 1774952..1776016(+) (comM) [Endozoicomonas sp. GU-1 strain Ap1-3]
MLGLLKKKSNAVLGVDISSTSVKVIELGLKGSVYRVEAFCVEPLPPGAVVENNIHEVDVIGEAVARALSQSRTGLKNAAV
AVSGAAVITKTIDMDASLSEDEMETQISVEADQYIPYAMDEVAIDFEVQGLNEKNPERVEVLLAACRRDNVEMREEALRL
GGLTARVVDVEAFAMERACELIDGQLDLPDQDPVLAIVDIGATKTTLNVISRGKTVYTREQLFGGRQLTDEIQRRYGLTP
EEAEKAKCKGGLPDDYEPEVLEPFRETVVQQVSRSLQFFYSSSQFNDVDAIALVGGSASIPGMAEMIQDKLGVPTRLANP
FAGMSMAGKVDKDQLATEAPALMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=767363 O2T12_RS07590 WP_101745016.1 1774952..1776016(+) (comM) [Endozoicomonas sp. GU-1 strain Ap1-3]
GTGTTAGGGCTGCTGAAGAAAAAATCAAATGCCGTGTTAGGGGTGGATATAAGCTCGACATCTGTCAAAGTCATTGAGTT
AGGGCTGAAAGGCAGTGTTTACCGGGTCGAAGCTTTCTGTGTTGAGCCCCTTCCGCCAGGAGCCGTGGTTGAAAATAATA
TTCATGAAGTTGATGTCATTGGTGAAGCCGTTGCAAGAGCTCTCTCCCAATCCAGAACTGGCCTGAAAAACGCCGCCGTT
GCGGTGTCAGGCGCTGCCGTTATCACCAAAACCATCGATATGGATGCTTCCCTCAGTGAAGATGAGATGGAAACCCAGAT
TTCTGTTGAGGCAGATCAGTATATTCCCTACGCCATGGATGAAGTGGCCATCGACTTTGAAGTTCAGGGTCTGAACGAAA
AAAATCCCGAGCGGGTTGAAGTTTTGCTGGCAGCCTGCCGTCGTGACAATGTTGAAATGCGCGAAGAGGCACTTCGACTT
GGTGGATTAACGGCCAGGGTTGTTGATGTCGAAGCCTTTGCCATGGAGCGAGCGTGCGAATTGATTGATGGCCAGCTTGA
CCTGCCAGATCAGGATCCGGTGCTGGCTATCGTCGATATTGGTGCCACGAAAACCACACTGAATGTGATCAGCCGGGGTA
AAACCGTATACACCCGTGAGCAGTTATTCGGTGGACGGCAGTTGACTGATGAGATTCAGCGCCGTTACGGGCTCACCCCT
GAAGAAGCCGAGAAAGCCAAGTGTAAAGGGGGGCTGCCTGATGATTATGAACCTGAAGTTCTGGAGCCCTTCCGGGAAAC
GGTGGTTCAGCAGGTATCACGTTCATTGCAATTCTTTTATTCATCCAGCCAGTTCAATGATGTGGATGCCATTGCCCTGG
TAGGAGGATCTGCATCAATCCCGGGTATGGCGGAAATGATTCAGGACAAACTGGGGGTCCCGACCAGGCTGGCAAATCCT
TTTGCCGGAATGTCCATGGCCGGGAAAGTGGATAAGGACCAACTGGCCACTGAGGCCCCGGCGCTGATGATCGCCTGTGG
CCTTGCCATGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	51.977	100	0.52
pilM	Acinetobacter baumannii D1279779	51.695	100	0.517
comM	Acinetobacter baylyi ADP1	48.588	100	0.486
pilM	Legionella pneumophila strain ERS1305867	43.503	100	0.435