Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | O6R09_RS00715 | Genome accession | NZ_CP114883 |
| Coordinates | 104892..105848 (+) | Length | 318 a.a. |
| NCBI ID | WP_154454143.1 | Uniprot ID | - |
| Organism | Streptococcus alactolyticus strain LGM | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 99892..110848
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O6R09_RS00675 (O6R09_00675) | - | 100795..101103 (+) | 309 | WP_154454148.1 | DUF1033 family protein | - |
| O6R09_RS00680 (O6R09_00680) | comGA/cglA | 101235..102176 (+) | 942 | WP_269725665.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| O6R09_RS00685 (O6R09_00685) | comYB | 102058..103143 (+) | 1086 | WP_374041727.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| O6R09_RS00690 (O6R09_00690) | comYC | 103143..103436 (+) | 294 | WP_235280789.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| O6R09_RS00695 (O6R09_00695) | comGD | 103399..103851 (+) | 453 | WP_154454146.1 | competence type IV pilus minor pilin ComGD | - |
| O6R09_RS00700 (O6R09_00700) | comGE | 103874..104098 (+) | 225 | WP_154454160.1 | competence type IV pilus minor pilin ComGE | - |
| O6R09_RS00705 (O6R09_00705) | comYF | 104058..104519 (+) | 462 | WP_269725666.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| O6R09_RS00710 (O6R09_00710) | comGG | 104491..104817 (+) | 327 | WP_154454144.1 | competence type IV pilus minor pilin ComGG | - |
| O6R09_RS00715 (O6R09_00715) | comYH | 104892..105848 (+) | 957 | WP_154454143.1 | class I SAM-dependent methyltransferase | Machinery gene |
| O6R09_RS00720 (O6R09_00720) | - | 105900..107114 (+) | 1215 | WP_154454142.1 | acetate kinase | - |
| O6R09_RS00725 (O6R09_00725) | - | 107235..107873 (+) | 639 | WP_154454141.1 | CPBP family intramembrane glutamic endopeptidase | - |
| O6R09_RS00730 (O6R09_00730) | proC | 107907..108677 (-) | 771 | WP_235280787.1 | pyrroline-5-carboxylate reductase | - |
| O6R09_RS00735 (O6R09_00735) | pepA | 108695..109762 (-) | 1068 | WP_154454139.1 | glutamyl aminopeptidase | - |
| O6R09_RS00740 (O6R09_00740) | - | 109818..110108 (+) | 291 | WP_154454138.1 | DUF4651 domain-containing protein | - |
| O6R09_RS00745 (O6R09_00745) | - | 110105..110422 (+) | 318 | WP_168261077.1 | thioredoxin family protein | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 35908.73 Da Isoelectric Point: 4.3264
>NTDB_id=767310 O6R09_RS00715 WP_154454143.1 104892..105848(+) (comYH) [Streptococcus alactolyticus strain LGM]
MNFEKIEQAYDFILENIQLIENELKTHLYDALIEQNSFYLGEEGASEEVAANNDKLRQLQLSQEEWRRAFQFIFIKAAQT
EQLQANHQFTPDSVGFILLFLVESLTAPDTVDVLEIGSGTGNLAETLLTNSSKTLNYLGIEVDDLLIDLSASIAEVMGSS
AQFIQEDAVRPQILKESDVIISDLPVGFYPNDAIAKRYQVASSKEHTYAHHLLMEQSLKYLKKDGLAIFLAPSDLLTSPQ
SDLLKEWLKGYADVIAVITLPETLFGSAASTKSIFVFKKQSTHPVETFVYPLVDLKEQAVLEDFVKEFQNWKKDNRLF
MNFEKIEQAYDFILENIQLIENELKTHLYDALIEQNSFYLGEEGASEEVAANNDKLRQLQLSQEEWRRAFQFIFIKAAQT
EQLQANHQFTPDSVGFILLFLVESLTAPDTVDVLEIGSGTGNLAETLLTNSSKTLNYLGIEVDDLLIDLSASIAEVMGSS
AQFIQEDAVRPQILKESDVIISDLPVGFYPNDAIAKRYQVASSKEHTYAHHLLMEQSLKYLKKDGLAIFLAPSDLLTSPQ
SDLLKEWLKGYADVIAVITLPETLFGSAASTKSIFVFKKQSTHPVETFVYPLVDLKEQAVLEDFVKEFQNWKKDNRLF
Nucleotide
Download Length: 957 bp
>NTDB_id=767310 O6R09_RS00715 WP_154454143.1 104892..105848(+) (comYH) [Streptococcus alactolyticus strain LGM]
ATGAATTTTGAAAAAATCGAACAAGCCTACGATTTCATTTTAGAAAATATCCAATTGATTGAAAATGAGTTGAAAACACA
TCTTTACGATGCCCTGATTGAACAAAACTCGTTTTATCTTGGAGAAGAAGGTGCAAGTGAGGAAGTAGCTGCAAATAATG
ACAAACTACGTCAATTGCAATTAAGTCAGGAAGAGTGGCGTAGAGCCTTTCAATTTATTTTCATTAAGGCAGCTCAAACC
GAGCAATTACAAGCCAATCACCAATTCACACCAGATAGCGTGGGATTTATCTTACTATTTTTAGTAGAAAGCTTAACAGC
CCCTGATACGGTTGATGTGTTAGAAATCGGTAGTGGAACGGGAAATTTGGCTGAAACTTTATTAACAAACAGTTCCAAAA
CCCTGAACTATCTTGGTATTGAAGTGGATGATTTATTGATTGATTTATCTGCTAGTATCGCTGAAGTGATGGGCTCATCT
GCTCAGTTTATCCAAGAGGATGCTGTACGCCCACAAATTTTAAAAGAAAGCGATGTGATTATTAGTGATTTACCAGTCGG
TTTTTATCCTAATGATGCCATTGCTAAACGTTACCAAGTGGCTAGCAGCAAAGAACACACCTACGCTCACCATTTGTTAA
TGGAGCAATCTTTGAAATACCTGAAAAAAGATGGTTTGGCTATCTTTTTAGCACCGTCTGATTTGTTGACAAGTCCACAG
AGTGATTTGCTTAAAGAGTGGTTAAAAGGCTATGCAGATGTGATTGCGGTCATTACCTTGCCTGAAACCTTATTTGGTAG
TGCAGCCAGCACCAAGTCCATCTTTGTTTTCAAAAAACAATCCACTCATCCAGTGGAAACTTTTGTTTACCCCTTGGTAG
ATTTGAAAGAACAAGCTGTTTTGGAAGATTTTGTAAAAGAATTTCAAAATTGGAAAAAAGACAATAGGCTTTTCTAA
ATGAATTTTGAAAAAATCGAACAAGCCTACGATTTCATTTTAGAAAATATCCAATTGATTGAAAATGAGTTGAAAACACA
TCTTTACGATGCCCTGATTGAACAAAACTCGTTTTATCTTGGAGAAGAAGGTGCAAGTGAGGAAGTAGCTGCAAATAATG
ACAAACTACGTCAATTGCAATTAAGTCAGGAAGAGTGGCGTAGAGCCTTTCAATTTATTTTCATTAAGGCAGCTCAAACC
GAGCAATTACAAGCCAATCACCAATTCACACCAGATAGCGTGGGATTTATCTTACTATTTTTAGTAGAAAGCTTAACAGC
CCCTGATACGGTTGATGTGTTAGAAATCGGTAGTGGAACGGGAAATTTGGCTGAAACTTTATTAACAAACAGTTCCAAAA
CCCTGAACTATCTTGGTATTGAAGTGGATGATTTATTGATTGATTTATCTGCTAGTATCGCTGAAGTGATGGGCTCATCT
GCTCAGTTTATCCAAGAGGATGCTGTACGCCCACAAATTTTAAAAGAAAGCGATGTGATTATTAGTGATTTACCAGTCGG
TTTTTATCCTAATGATGCCATTGCTAAACGTTACCAAGTGGCTAGCAGCAAAGAACACACCTACGCTCACCATTTGTTAA
TGGAGCAATCTTTGAAATACCTGAAAAAAGATGGTTTGGCTATCTTTTTAGCACCGTCTGATTTGTTGACAAGTCCACAG
AGTGATTTGCTTAAAGAGTGGTTAAAAGGCTATGCAGATGTGATTGCGGTCATTACCTTGCCTGAAACCTTATTTGGTAG
TGCAGCCAGCACCAAGTCCATCTTTGTTTTCAAAAAACAATCCACTCATCCAGTGGAAACTTTTGTTTACCCCTTGGTAG
ATTTGAAAGAACAAGCTGTTTTGGAAGATTTTGTAAAAGAATTTCAAAATTGGAAAAAAGACAATAGGCTTTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
68.571 |
99.057 |
0.679 |
| comYH | Streptococcus mutans UA159 |
68.254 |
99.057 |
0.676 |