Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   O4J62_RS00675 Genome accession   NZ_CP114601
Coordinates   153558..154781 (-) Length   407 a.a.
NCBI ID   WP_004970117.1    Uniprot ID   A0A2A5PE16
Organism   Acinetobacter towneri strain TT1-3_T     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 148558..159781
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O4J62_RS00645 (O4J62_00645) - 148682..149272 (-) 591 WP_323712860.1 hypothetical protein -
  O4J62_RS00650 (O4J62_00650) - 149597..150142 (-) 546 WP_004970127.1 glutathione peroxidase -
  O4J62_RS00655 (O4J62_00655) - 150428..151336 (+) 909 WP_096902732.1 DMT family transporter -
  O4J62_RS00660 (O4J62_00660) - 151421..151816 (-) 396 WP_323712634.1 hypothetical protein -
  O4J62_RS00665 (O4J62_00665) - 151847..152905 (+) 1059 WP_323712635.1 transposase -
  O4J62_RS00670 (O4J62_00670) - 152940..153509 (-) 570 WP_004970120.1 L-threonylcarbamoyladenylate synthase -
  O4J62_RS00675 (O4J62_00675) dprA 153558..154781 (-) 1224 WP_004970117.1 DNA-processing protein DprA Machinery gene
  O4J62_RS00680 (O4J62_00680) tsaP 154799..155956 (-) 1158 WP_323712636.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  O4J62_RS00685 (O4J62_00685) def 156076..156606 (+) 531 WP_019837182.1 peptide deformylase -
  O4J62_RS00690 (O4J62_00690) - 156722..157156 (+) 435 WP_154321168.1 DUF2946 family protein -
  O4J62_RS00695 (O4J62_00695) - 157220..159250 (+) 2031 WP_323712637.1 TonB-dependent copper receptor -

Sequence

Protein


Download         Length: 407 a.a.        Molecular weight: 45044.12 Da        Isoelectric Point: 6.7787

>NTDB_id=766783 O4J62_RS00675 WP_004970117.1 153558..154781(-) (dprA) [Acinetobacter towneri strain TT1-3_T]
MLNSFSPQQINYILLWYLVQHSLSSFSKLVQHYGSVAAAVQPEHLLTWSDVRIHANHLQRAKEYLSPTGQLAFEQCLNQL
QQQCDFILTLDDADYPNQLRPYSNKPPILFGQGNAQALLQAQIAIVGSRKASPHGRQVAYDFAYYLSEQGFFINSGLAQG
IDEAAHQGALQHQRTIAVMGTGLDSTYPSAHHSLRQKIVESGGAVITEFLPQTKPLQQHFPRRNRIVSGLSLGVIVAEAS
LNSGSLITAKLAAEQGKLIFAIPGHIYSEFHQGCHQLIREGAILVDHPEQVIEDLALPTQWQYQQNQIASSQNQTTAAST
KAKLSTPPTEAILQTTTTKTADTSTPHIPEHLLALYQQLDWVGQSIDHLAQQLNLDIATLTSALMELELMGFCLQQSGLY
LRCRPLK

Nucleotide


Download         Length: 1224 bp        

>NTDB_id=766783 O4J62_RS00675 WP_004970117.1 153558..154781(-) (dprA) [Acinetobacter towneri strain TT1-3_T]
ATGTTGAATTCATTCAGCCCACAGCAAATCAACTACATTTTGTTGTGGTATTTGGTTCAACATTCACTGTCTAGTTTTTC
CAAACTCGTACAACATTATGGTTCCGTGGCTGCCGCAGTGCAGCCCGAACACCTCCTCACATGGTCAGATGTGCGCATTC
ATGCCAACCATCTACAACGCGCCAAAGAATATCTCAGCCCAACAGGGCAACTCGCCTTTGAACAATGTCTGAATCAACTG
CAACAGCAGTGCGATTTTATTCTAACTTTGGACGATGCGGACTATCCCAATCAGTTACGACCCTATTCCAACAAGCCACC
CATTTTATTTGGGCAAGGCAATGCACAGGCTTTGTTGCAAGCGCAAATTGCGATTGTCGGCAGTCGCAAAGCCAGCCCGC
ATGGTCGGCAAGTGGCTTATGATTTTGCTTATTATTTAAGTGAACAAGGGTTCTTTATCAATAGTGGTTTGGCACAAGGT
ATTGATGAAGCCGCACATCAAGGTGCTTTGCAACATCAACGTACCATTGCAGTCATGGGCACAGGTTTGGACAGCACTTA
TCCAAGTGCACATCACAGCCTGCGCCAAAAAATTGTAGAATCTGGTGGTGCCGTGATTACGGAGTTTTTACCACAGACTA
AGCCCTTACAGCAACATTTTCCACGACGTAACCGTATTGTCAGTGGACTAAGTTTAGGCGTGATTGTTGCTGAAGCCAGT
TTAAATAGTGGCTCGCTGATTACCGCGAAACTGGCAGCAGAGCAAGGCAAATTAATTTTTGCCATTCCAGGACATATTTA
CAGTGAATTTCATCAAGGTTGCCACCAATTGATTCGTGAAGGTGCAATTTTAGTGGATCATCCTGAACAAGTGATTGAAG
ATTTAGCCCTACCCACCCAATGGCAATATCAACAAAACCAAATAGCATCAAGCCAAAATCAGACTACAGCAGCTTCAACA
AAAGCAAAATTATCTACACCACCGACTGAAGCAATACTTCAAACCACCACAACAAAAACAGCAGATACAAGTACACCGCA
TATTCCCGAGCATTTATTGGCACTGTATCAACAACTGGATTGGGTCGGACAAAGCATCGATCACTTGGCACAGCAACTGA
ATTTAGATATTGCCACACTCACCAGCGCATTAATGGAACTGGAACTCATGGGCTTCTGTTTACAACAATCAGGTTTATAT
CTGCGTTGTCGTCCACTCAAATAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(87-286)

DprA winged helix domain (DprA_WH)

(353-398)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A5PE16

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

62.129

99.263

0.617
  dprA Acinetobacter baumannii D1279779

61.634

99.263

0.612
  dprA Acinetobacter baylyi ADP1

58.416

99.263

0.58