Detailed information NTG0765876

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: QNK10_RS13880
• Genome accession: NZ_CP125982
• Coordinates: 2576243..2576848 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain ZKY05
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2571243..2581848

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNK10_RS13850 (QNK10_13880)	-	2572056..2572445 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
QNK10_RS13855 (QNK10_13885)	yajC	2572502..2572768 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
QNK10_RS13860 (QNK10_13890)	tgt	2572805..2573950 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
QNK10_RS13865 (QNK10_13895)	queA	2573977..2575005 (-)	1029	WP_014477530.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
QNK10_RS13870 (QNK10_13900)	yrzS	2575035..2575235 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
QNK10_RS13875 (QNK10_13905)	ruvB	2575228..2576232 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
QNK10_RS13880 (QNK10_13910)	ruvA	2576243..2576848 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
QNK10_RS13885 (QNK10_13915)	bofC	2576987..2577499 (-)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
QNK10_RS13890 (QNK10_13920)	csbX	2577547..2578854 (-)	1308	WP_014480439.1	MFS transporter	-
QNK10_RS13895 (QNK10_13925)	iolG	2578925..2579950 (-)	1026	WP_014480440.1	inositol 2-dehydrogenase	-
QNK10_RS13900 (QNK10_13930)	yrzF	2580188..2580835 (+)	648	WP_014480441.1	phosphotransferase	-
QNK10_RS13905 (QNK10_13935)	-	2580881..2581003 (-)	123	WP_003229707.1	hypothetical protein	-
QNK10_RS13910 (QNK10_13945)	-	2581166..2581534 (+)	369	WP_186437837.1	DUF5412 family protein	-
QNK10_RS13915 (QNK10_13950)	-	2581541..2581681 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=765876 QNK10_RS13880 WP_003229717.1 2576243..2576848(-) (ruvA) [Bacillus subtilis strain ZKY05]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=765876 QNK10_RS13880 WP_003229717.1 2576243..2576848(-) (ruvA) [Bacillus subtilis strain ZKY05]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408