Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OZ656_RS19480 Genome accession   NZ_CP114373
Coordinates   4175945..4176337 (+) Length   130 a.a.
NCBI ID   WP_011787170.1    Uniprot ID   -
Organism   Marinobacter sp. LM1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4170945..4181337
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OZ656_RS19450 (OZ656_19375) - 4171218..4172237 (-) 1020 WP_022991331.1 aspartate carbamoyltransferase catalytic subunit -
  OZ656_RS19455 (OZ656_19380) pyrR 4172265..4172774 (-) 510 WP_011787165.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  OZ656_RS19460 (OZ656_19385) ruvX 4172794..4173225 (-) 432 WP_011787166.1 Holliday junction resolvase RuvX -
  OZ656_RS19465 (OZ656_19390) - 4173218..4173784 (-) 567 WP_379944816.1 YqgE/AlgH family protein -
  OZ656_RS19470 (OZ656_19395) - 4173781..4174647 (-) 867 WP_379944817.1 TonB family protein -
  OZ656_RS19475 (OZ656_19400) gshB 4174694..4175647 (-) 954 WP_379944818.1 glutathione synthase -
  OZ656_RS19480 (OZ656_19405) pilG 4175945..4176337 (+) 393 WP_011787170.1 twitching motility response regulator PilG Regulator
  OZ656_RS19485 (OZ656_19410) pilH 4176371..4176733 (+) 363 WP_011787171.1 twitching motility response regulator PilH -
  OZ656_RS19490 (OZ656_19415) - 4176754..4177299 (+) 546 WP_224850813.1 chemotaxis protein CheW -
  OZ656_RS19495 (OZ656_19420) - 4177393..4179468 (+) 2076 WP_011787173.1 methyl-accepting chemotaxis protein -
  OZ656_RS19500 (OZ656_19425) - 4179496..4180395 (+) 900 WP_011787174.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14627.92 Da        Isoelectric Point: 5.2241

>NTDB_id=765710 OZ656_RS19480 WP_011787170.1 4175945..4176337(+) (pilG) [Marinobacter sp. LM1]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPDIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYMPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=765710 OZ656_RS19480 WP_011787170.1 4175945..4176337(+) (pilG) [Marinobacter sp. LM1]
ATGGATGACAACTTCGAGAACCTGAAGATCATGGTGATTGACGACAGCAAGACCATTCGTCGCACCGCGGAAACCCTTCT
TAAAAAGGTTGGCTGTGAGGTTATCACTGCCACAGATGGCTTTGACGCTCTGGCCAAGATTGCCGACTCCCAGCCGGACA
TCATTTTTGTGGATATCATGATGCCCCGCCTGGACGGCTACCAGACCTGCGCATTGATCAAGAACAATTCCTCCTTTAAA
AAGACGCCGGTTATCATGCTTTCGAGCAAGGACGGCCTGTTCGACAAGGCAAAAGGCCGAATCGTAGGCTCGGACCAGTA
TCTGACCAAACCGTTCAGCAAGGATGAGCTGCTTAACACCATCCGCCAATACATGCCTCAGGCGGAACAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.6

96.154

0.746
  vicR Streptococcus mutans UA159

41.803

93.846

0.392
  micA Streptococcus pneumoniae Cp1015

39.669

93.077

0.369
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362