Detailed information NTG0765577

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: QM970_RS13915
• Genome accession: NZ_CP125980
• Coordinates: 2579041..2579646 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain ZKY03
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2574041..2584646

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QM970_RS13885 (QM970_13895)	-	2574854..2575243 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
QM970_RS13890 (QM970_13900)	yajC	2575300..2575566 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
QM970_RS13895 (QM970_13905)	tgt	2575603..2576748 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
QM970_RS13900 (QM970_13910)	queA	2576775..2577803 (-)	1029	WP_014477530.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
QM970_RS13905 (QM970_13915)	yrzS	2577833..2578033 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
QM970_RS13910 (QM970_13920)	ruvB	2578026..2579030 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
QM970_RS13915 (QM970_13925)	ruvA	2579041..2579646 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
QM970_RS13920 (QM970_13930)	bofC	2579785..2580297 (-)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
QM970_RS13925 (QM970_13935)	csbX	2580345..2581652 (-)	1308	WP_014480439.1	MFS transporter	-
QM970_RS13930 (QM970_13940)	iolG	2581723..2582748 (-)	1026	WP_014480440.1	inositol 2-dehydrogenase	-
QM970_RS13935 (QM970_13945)	yrzF	2582986..2583633 (+)	648	WP_014480441.1	phosphotransferase	-
QM970_RS13940 (QM970_13950)	-	2583679..2583801 (-)	123	WP_003229707.1	hypothetical protein	-
QM970_RS13945 (QM970_13960)	-	2583964..2584332 (+)	369	WP_186437837.1	DUF5412 family protein	-
QM970_RS13950 (QM970_13965)	-	2584339..2584479 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=765577 QM970_RS13915 WP_003229717.1 2579041..2579646(-) (ruvA) [Bacillus subtilis strain ZKY03]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=765577 QM970_RS13915 WP_003229717.1 2579041..2579646(-) (ruvA) [Bacillus subtilis strain ZKY03]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408