Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   O0R49_RS05835 Genome accession   NZ_CP114177
Coordinates   1141189..1141386 (+) Length   65 a.a.
NCBI ID   WP_024425054.1    Uniprot ID   A0AAX0Z5U3
Organism   Bacillus safensis strain PLA 1006     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1136189..1146386
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O0R49_RS05805 (O0R49_05805) - 1136593..1136772 (+) 180 WP_008348517.1 YjzC family protein -
  O0R49_RS05810 (O0R49_05810) - 1136946..1138211 (+) 1266 WP_144470143.1 MFS transporter -
  O0R49_RS05815 (O0R49_05815) - 1138326..1138520 (-) 195 WP_003211779.1 YjzD family protein -
  O0R49_RS05820 (O0R49_05820) - 1138733..1139473 (+) 741 WP_048238467.1 hypothetical protein -
  O0R49_RS05825 (O0R49_05825) - 1139547..1140122 (+) 576 WP_095408187.1 nad binding enzyme -
  O0R49_RS05830 (O0R49_05830) med 1140214..1141176 (+) 963 WP_144470145.1 BMP family ABC transporter substrate-binding protein Regulator
  O0R49_RS05835 (O0R49_05835) comZ 1141189..1141386 (+) 198 WP_024425054.1 ComZ family protein Regulator
  O0R49_RS05840 (O0R49_05840) - 1141397..1141630 (-) 234 WP_144470147.1 hypothetical protein -
  O0R49_RS05845 (O0R49_05845) - 1141802..1142740 (+) 939 WP_095408190.1 beta-ketoacyl-ACP synthase III -
  O0R49_RS05850 (O0R49_05850) fabF 1142762..1144003 (+) 1242 WP_041089814.1 beta-ketoacyl-ACP synthase II -
  O0R49_RS05855 (O0R49_05855) - 1144081..1144884 (+) 804 WP_095408191.1 DUF2268 domain-containing protein -
  O0R49_RS05860 (O0R49_05860) - 1145034..1146014 (+) 981 WP_095408192.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7405.45 Da        Isoelectric Point: 4.1652

>NTDB_id=764697 O0R49_RS05835 WP_024425054.1 1141189..1141386(+) (comZ) [Bacillus safensis strain PLA 1006]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLTLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=764697 O0R49_RS05835 WP_024425054.1 1141189..1141386(+) (comZ) [Bacillus safensis strain PLA 1006]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCGAAGGAAGAGTTAGATAAAGC
AGGGATTCAGCTTGAGCCTGAAGCACTTCAGCCGCTTCTAACATTATTTACATCTGTCATGCAGGAAGCATACGAGCTTG
GAAAAGCGGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677