Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | H7R62_RS20235 | Genome accession | NZ_AP022038 |
| Coordinates | 4362547..4363134 (+) | Length | 195 a.a. |
| NCBI ID | WP_005340181.1 | Uniprot ID | A0A165S798 |
| Organism | Aeromonas veronii strain WP3-W19-ESBL-03 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4357547..4368134
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R62_RS20230 (WP3W19E03_38990) | uvrA | 4359345..4362173 (-) | 2829 | WP_182938343.1 | excinuclease ABC subunit UvrA | - |
| H7R62_RS20235 (WP3W19E03_39000) | ssb | 4362547..4363134 (+) | 588 | WP_005340181.1 | single-stranded DNA-binding protein | Machinery gene |
| H7R62_RS20240 (WP3W19E03_39010) | - | 4363269..4364024 (+) | 756 | WP_232093578.1 | substrate-binding periplasmic protein | - |
| H7R62_RS23500 (WP3W19E03_39020) | - | 4364129..4364254 (-) | 126 | WP_257686581.1 | hypothetical protein | - |
| H7R62_RS20245 (WP3W19E03_39040) | - | 4364716..4365618 (+) | 903 | WP_139710703.1 | cation diffusion facilitator family transporter | - |
| H7R62_RS20250 (WP3W19E03_39050) | yjbD | 4365765..4366049 (+) | 285 | WP_042063489.1 | DUF3811 domain-containing protein | - |
| H7R62_RS20255 (WP3W19E03_39060) | cspA | 4366645..4366857 (+) | 213 | WP_005316548.1 | RNA chaperone/antiterminator CspA | - |
Sequence
Protein
Download Length: 195 a.a. Molecular weight: 21583.11 Da Isoelectric Point: 5.9301
>NTDB_id=76366 H7R62_RS20235 WP_005340181.1 4362547..4363134(+) (ssb) [Aeromonas veronii strain WP3-W19-ESBL-03]
MASRGINKVILIGNLGQDPEVRYMPSGGAVTNITLATSETWRDKQTGEQKERTEWHRVVFMGKLAEVAGEYLKKGSQVYV
EGKLQTRKWQDQSGQERYTTEVLVDSFTGVMQMLGGRPQGGQGMGQNMGGQSQGNWGQPQQSMPAQQPMNQQRPAPAPQQ
NMQPQGGYGRPAQQPQSAPPVYNEPPMDFDDDIPF
MASRGINKVILIGNLGQDPEVRYMPSGGAVTNITLATSETWRDKQTGEQKERTEWHRVVFMGKLAEVAGEYLKKGSQVYV
EGKLQTRKWQDQSGQERYTTEVLVDSFTGVMQMLGGRPQGGQGMGQNMGGQSQGNWGQPQQSMPAQQPMNQQRPAPAPQQ
NMQPQGGYGRPAQQPQSAPPVYNEPPMDFDDDIPF
Nucleotide
Download Length: 588 bp
>NTDB_id=76366 H7R62_RS20235 WP_005340181.1 4362547..4363134(+) (ssb) [Aeromonas veronii strain WP3-W19-ESBL-03]
ATGGCCAGTCGAGGCATCAATAAAGTCATTCTGATCGGTAACCTCGGGCAAGACCCGGAAGTACGCTACATGCCGAGTGG
CGGTGCTGTGACCAACATTACTCTGGCTACCTCTGAAACCTGGCGCGACAAGCAGACCGGTGAGCAGAAAGAGCGTACCG
AATGGCACCGCGTTGTCTTCATGGGCAAACTGGCCGAAGTGGCTGGCGAGTACCTGAAGAAGGGCTCCCAAGTCTATGTC
GAAGGCAAACTGCAAACCCGCAAATGGCAAGATCAGAGCGGCCAGGAGCGCTATACCACTGAAGTGCTGGTCGACAGCTT
CACTGGCGTGATGCAGATGCTGGGTGGCCGTCCGCAAGGCGGTCAGGGCATGGGCCAGAACATGGGTGGCCAATCCCAGG
GTAACTGGGGTCAGCCGCAGCAGAGCATGCCTGCCCAGCAGCCGATGAACCAGCAGCGCCCGGCGCCGGCTCCGCAGCAA
AACATGCAGCCGCAAGGCGGTTATGGCCGTCCTGCCCAGCAGCCACAATCTGCACCGCCGGTATATAACGAGCCGCCGAT
GGATTTCGACGACGATATCCCCTTCTAA
ATGGCCAGTCGAGGCATCAATAAAGTCATTCTGATCGGTAACCTCGGGCAAGACCCGGAAGTACGCTACATGCCGAGTGG
CGGTGCTGTGACCAACATTACTCTGGCTACCTCTGAAACCTGGCGCGACAAGCAGACCGGTGAGCAGAAAGAGCGTACCG
AATGGCACCGCGTTGTCTTCATGGGCAAACTGGCCGAAGTGGCTGGCGAGTACCTGAAGAAGGGCTCCCAAGTCTATGTC
GAAGGCAAACTGCAAACCCGCAAATGGCAAGATCAGAGCGGCCAGGAGCGCTATACCACTGAAGTGCTGGTCGACAGCTT
CACTGGCGTGATGCAGATGCTGGGTGGCCGTCCGCAAGGCGGTCAGGGCATGGGCCAGAACATGGGTGGCCAATCCCAGG
GTAACTGGGGTCAGCCGCAGCAGAGCATGCCTGCCCAGCAGCCGATGAACCAGCAGCGCCCGGCGCCGGCTCCGCAGCAA
AACATGCAGCCGCAAGGCGGTTATGGCCGTCCTGCCCAGCAGCCACAATCTGCACCGCCGGTATATAACGAGCCGCCGAT
GGATTTCGACGACGATATCCCCTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
69.347 |
100 |
0.708 |
| ssb | Glaesserella parasuis strain SC1401 |
53.886 |
98.974 |
0.533 |
| ssb | Neisseria meningitidis MC58 |
46.597 |
97.949 |
0.456 |
| ssb | Neisseria gonorrhoeae MS11 |
46.842 |
97.436 |
0.456 |