Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   OZX61_RS11445 Genome accession   NZ_CP113932
Coordinates   2380483..2381604 (+) Length   373 a.a.
NCBI ID   WP_195771823.1    Uniprot ID   -
Organism   Acinetobacter sp. ESL0695     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 2375483..2386604
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OZX61_RS11430 (OZX61_11430) - 2378021..2378524 (-) 504 WP_277094849.1 hypothetical protein -
  OZX61_RS11435 (OZX61_11435) def 2378664..2379188 (-) 525 WP_195771821.1 peptide deformylase -
  OZX61_RS11440 (OZX61_11440) tsaP 2379302..2380468 (+) 1167 WP_277094850.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  OZX61_RS11445 (OZX61_11445) dprA 2380483..2381604 (+) 1122 WP_195771823.1 DNA-processing protein DprA Machinery gene
  OZX61_RS11450 (OZX61_11450) - 2381616..2382185 (+) 570 WP_277094851.1 Sua5/YciO/YrdC/YwlC family protein -
  OZX61_RS11455 (OZX61_11455) - 2382473..2383393 (-) 921 WP_277094852.1 DMT family transporter -
  OZX61_RS11460 (OZX61_11460) - 2383523..2384269 (+) 747 WP_277094855.1 helix-turn-helix transcriptional regulator -
  OZX61_RS11465 (OZX61_11465) - 2384314..2384856 (+) 543 WP_277094856.1 glutathione peroxidase -
  OZX61_RS11470 (OZX61_11470) - 2384889..2385737 (-) 849 WP_277094857.1 D-hexose-6-phosphate mutarotase -
  OZX61_RS11475 (OZX61_11475) - 2385825..2386244 (-) 420 WP_195771829.1 F0F1 ATP synthase subunit epsilon -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 41492.25 Da        Isoelectric Point: 6.9461

>NTDB_id=763636 OZX61_RS11445 WP_195771823.1 2380483..2381604(+) (dprA) [Acinetobacter sp. ESL0695]
MLNPITSHQVAIIKLWHLVNHSLTTYYKLIEHFGSANYALLPSNIVKWSMLGIHASHIKRASQFSDLEVQHHLDSIIEKT
IQYCDFVCTPADSTYPHQLQNYADKPPILFGQGNSQLLNTPSIAIIGSRKATKYGEKNGYDFAYYLSEKGYTVISGLAEG
IDQAAHLGAISHHNTVAIMATGIDQTYPKHHQKLRQKILETGNTIITEFLPGTKPLQHHFPRRNRLVSGMSLGVVVVEAH
LPSGSLGTAKCAANQGKTVFAIPGNIHDKVYEGCHELIREGATLVFHPQQIIEDLSFSFGTISQTSEIHSSHEDIFIPVH
LKNLYEQLSWQGQDLDQIASSLSLSTAEITAQLMELELLELCIQHAGQYSRLK

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=763636 OZX61_RS11445 WP_195771823.1 2380483..2381604(+) (dprA) [Acinetobacter sp. ESL0695]
ATGCTTAATCCTATTACATCACATCAAGTCGCCATAATTAAGTTATGGCACTTGGTAAATCATTCCTTAACTACCTATTA
TAAACTGATAGAACATTTTGGTAGTGCAAATTATGCCCTTTTACCATCAAATATTGTCAAATGGTCTATGCTTGGTATAC
ATGCAAGTCATATTAAAAGAGCAAGTCAATTTTCAGATTTAGAAGTACAACATCACTTAGATTCAATTATTGAAAAGACA
ATTCAGTACTGTGATTTTGTTTGTACTCCAGCAGACTCAACCTATCCTCATCAATTACAAAACTATGCTGATAAGCCTCC
CATTCTCTTTGGTCAAGGAAATAGTCAACTTTTAAATACACCATCAATCGCTATCATTGGAAGTAGAAAGGCAACGAAAT
ACGGTGAAAAAAATGGCTATGATTTTGCTTATTATCTTTCAGAAAAAGGGTATACAGTCATTAGTGGACTCGCGGAAGGG
ATTGACCAAGCAGCACACTTAGGTGCCATAAGTCACCATAATACAGTTGCTATTATGGCAACAGGTATAGATCAAACTTA
TCCCAAACATCATCAAAAACTTAGACAAAAAATTTTAGAAACGGGAAATACTATTATTACCGAGTTTCTACCTGGAACAA
AGCCACTACAACATCATTTTCCAAGAAGAAATAGACTTGTTAGTGGAATGAGTTTGGGGGTTGTTGTGGTTGAAGCACAT
TTACCTAGCGGCTCTTTAGGTACCGCCAAATGTGCAGCGAACCAAGGAAAGACCGTATTTGCCATACCAGGAAATATTCA
TGATAAAGTATATGAAGGCTGTCATGAGCTGATTCGAGAAGGCGCCACACTGGTTTTTCATCCACAACAAATTATTGAAG
ATCTTTCTTTTTCATTTGGAACTATCTCTCAAACTTCAGAAATACATTCATCTCATGAAGATATCTTTATTCCAGTACAC
TTAAAAAATTTATATGAGCAACTGTCTTGGCAAGGACAGGATTTAGACCAAATCGCTTCATCCCTTTCTTTATCTACTGC
AGAAATTACAGCTCAGCTTATGGAGCTTGAGCTGTTAGAATTATGTATACAGCATGCGGGACAATATTCTCGTTTAAAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

51.459

100

0.52

  dprA Acinetobacter baumannii D1279779

50.928

100

0.515

  dprA Acinetobacter baylyi ADP1

50.263

100

0.512