Detailed information    

insolico Bioinformatically predicted

Overview

Name   tsaP   Type   Machinery gene
Locus tag   OZX61_RS11440 Genome accession   NZ_CP113932
Coordinates   2379302..2380468 (+) Length   388 a.a.
NCBI ID   WP_277094850.1    Uniprot ID   -
Organism   Acinetobacter sp. ESL0695     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2374302..2385468
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OZX61_RS11425 (OZX61_11425) - 2375476..2378064 (-) 2589 WP_277094848.1 autotransporter domain-containing protein -
  OZX61_RS11430 (OZX61_11430) - 2378021..2378524 (-) 504 WP_277094849.1 hypothetical protein -
  OZX61_RS11435 (OZX61_11435) def 2378664..2379188 (-) 525 WP_195771821.1 peptide deformylase -
  OZX61_RS11440 (OZX61_11440) tsaP 2379302..2380468 (+) 1167 WP_277094850.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  OZX61_RS11445 (OZX61_11445) dprA 2380483..2381604 (+) 1122 WP_195771823.1 DNA-processing protein DprA Machinery gene
  OZX61_RS11450 (OZX61_11450) - 2381616..2382185 (+) 570 WP_277094851.1 Sua5/YciO/YrdC/YwlC family protein -
  OZX61_RS11455 (OZX61_11455) - 2382473..2383393 (-) 921 WP_277094852.1 DMT family transporter -
  OZX61_RS11460 (OZX61_11460) - 2383523..2384269 (+) 747 WP_277094855.1 helix-turn-helix transcriptional regulator -
  OZX61_RS11465 (OZX61_11465) - 2384314..2384856 (+) 543 WP_277094856.1 glutathione peroxidase -

Sequence

Protein


Download         Length: 388 a.a.        Molecular weight: 42325.44 Da        Isoelectric Point: 9.4973

>NTDB_id=763635 OZX61_RS11440 WP_277094850.1 2379302..2380468(+) (tsaP) [Acinetobacter sp. ESL0695]
MKDDLNYTRTSSAMGLQKKLLSLSLKTLITIGISMGAVEMATAKSTLQLNNNAPSTYIVKSGDTLWGIAGVFLKSPLAWP
KIWANNRDIKNPNLIYPGDRLLLCKYNNNSPLVGKDLGDGCRGIISRHTGKASRGEIRLQPQVRVQPLDGAIPVIPLKNI
QVWLERAIILPQETLKDIPYVVGAEESHLMAGVGQKVYVKGNGIQTGQYYGIYQPTSPYILKDSTGHDYNAGNELTQNAR
ALATSVNNNIATLEIVESYNQEVRANNVVLPEKDIRLPSTFYPSTQKINGGSIIRVLGSIGAATKNSVVTLDRGELDGLK
AGQVFNISQPGHQIKDPKSNELINLPSEKAGSLIVFRTFDHLSYAYVLESFIPVKVGSNITTPNDVEN

Nucleotide


Download         Length: 1167 bp        

>NTDB_id=763635 OZX61_RS11440 WP_277094850.1 2379302..2380468(+) (tsaP) [Acinetobacter sp. ESL0695]
ATGAAAGATGATTTAAATTACACTCGCACTTCTAGTGCAATGGGGCTACAAAAAAAACTTTTGTCTTTATCTCTGAAGAC
ATTAATTACGATTGGTATCTCTATGGGAGCAGTAGAAATGGCTACTGCAAAAAGTACACTTCAACTGAACAATAATGCAC
CAAGCACTTACATTGTTAAATCAGGCGATACACTTTGGGGAATTGCAGGTGTCTTTTTAAAGTCACCATTAGCTTGGCCA
AAAATTTGGGCAAACAACCGTGATATTAAAAACCCTAATTTAATTTACCCGGGTGATCGTTTACTATTATGTAAATATAA
TAATAACTCACCACTTGTAGGCAAAGATTTAGGCGATGGTTGTAGAGGTATTATCTCTAGGCATACTGGTAAAGCAAGTC
GTGGTGAAATTCGATTGCAACCCCAAGTTCGCGTCCAACCATTAGATGGAGCTATTCCTGTAATTCCACTTAAAAACATT
CAGGTTTGGCTAGAACGAGCTATCATTTTACCTCAAGAAACCCTAAAAGATATTCCATATGTAGTTGGGGCAGAAGAAAG
CCATTTAATGGCAGGGGTAGGACAAAAAGTATATGTTAAAGGCAATGGTATTCAAACTGGGCAATACTATGGTATTTACC
AACCGACTTCGCCATATATCCTTAAAGATAGTACTGGGCATGACTACAATGCAGGTAATGAGTTAACTCAAAATGCCAGA
GCGCTCGCAACTAGCGTTAATAATAATATTGCAACTTTAGAAATTGTAGAAAGCTACAATCAAGAAGTCCGTGCAAACAA
TGTTGTACTTCCAGAGAAAGATATCCGATTACCATCAACATTCTATCCAAGCACACAAAAAATTAATGGTGGTTCAATTA
TTCGTGTTCTAGGTTCTATTGGTGCTGCAACAAAAAATAGTGTAGTTACTTTAGATCGTGGTGAACTTGATGGTTTAAAA
GCAGGTCAAGTATTTAATATCTCGCAACCAGGTCATCAGATTAAAGACCCTAAATCGAATGAGCTCATTAATTTACCTTC
TGAAAAAGCAGGTTCATTAATTGTTTTTAGAACTTTTGATCATTTGAGCTATGCTTATGTATTAGAAAGCTTTATTCCAG
TTAAAGTTGGTTCTAATATTACTACACCAAACGATGTGGAAAATTAA

Domains

Predicted by InterproScan.

LysM domain (LysM)

(57-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

49.741

99.485

0.495