Detailed information NTG0763630

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: OZX61_RS10715
• Genome accession: NZ_CP113932
• Coordinates: 2225010..2225867 (+)
• Length: 285 a.a.
• NCBI ID: WP_277094773.1
• Uniprot ID: -
• Organism: Acinetobacter sp. ESL0695
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2220010..2230867

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OZX61_RS10685 (OZX61_10685)	-	2220139..2220423 (+)	285	WP_277094769.1	putative quinol monooxygenase	-
OZX61_RS10695 (OZX61_10695)	secG	2220637..2220960 (-)	324	WP_195770900.1	preprotein translocase subunit SecG	-
OZX61_RS10700 (OZX61_10700)	tpiA	2220981..2221775 (-)	795	WP_277094770.1	triose-phosphate isomerase	-
OZX61_RS10705 (OZX61_10705)	pilB	2222046..2223764 (+)	1719	WP_277094771.1	type IV-A pilus assembly ATPase PilB	Machinery gene
OZX61_RS10710 (OZX61_10710)	pilC	2223787..2225010 (+)	1224	WP_277094772.1	type II secretion system F family protein	Machinery gene
OZX61_RS10715 (OZX61_10715)	pilD	2225010..2225867 (+)	858	WP_277094773.1	A24 family peptidase	Machinery gene
OZX61_RS10720 (OZX61_10720)	coaE	2225869..2226471 (+)	603	WP_195770895.1	dephospho-CoA kinase	-
OZX61_RS10725 (OZX61_10725)	rlmB	2226468..2227211 (-)	744	WP_277094774.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
OZX61_RS10730 (OZX61_10730)	-	2227321..2227644 (-)	324	WP_195770893.1	pyrimidine/purine nucleoside phosphorylase	-
OZX61_RS10735 (OZX61_10735)	recN	2227976..2229637 (+)	1662	WP_195770892.1	DNA repair protein RecN	-
OZX61_RS10740 (OZX61_10740)	-	2229731..2230285 (+)	555	WP_195771025.1	YqgE/AlgH family protein	-
OZX61_RS10745 (OZX61_10745)	ruvX	2230278..2230715 (+)	438	WP_195770891.1	Holliday junction resolvase RuvX	-

Sequence

Protein

• Length: 285 a.a.
• Molecular weight: 31677.19 Da
• Isoelectric Point: 8.1635

>NTDB_id=763630 OZX61_RS10715 WP_277094773.1 2225010..2225867(+) (pilD) [Acinetobacter sp. ESL0695]
MHDILILFLENPALLYVVVGLVGLCVGSFLNVVILRTPKMMEQEWKVECQSLLHPDQPIIDHEKLTLNHPASTCPQCHMG
IRWFHNIPLISWLVLRGKCASCKHPISIRYPFIEVLTAVTSITIAIVFGASVQMLFGLVFTWILITLTFIDFDTQLLPDR
FTFSLIGLGLAANSYSIFTTPTTAIWGTLIGFLCLWVVYILYKLITGKEGMGYGDFKLLAALGAWMGPMMLPLIILLSSV
VGVIIGLVVIKVKKNQAFAFGPYIAIAGWIAFIWGSKIMAIYLGQ

Nucleotide

• Length: 858 bp

>NTDB_id=763630 OZX61_RS10715 WP_277094773.1 2225010..2225867(+) (pilD) [Acinetobacter sp. ESL0695]
ATGCATGACATCTTAATTTTATTCCTCGAAAATCCAGCACTACTTTATGTAGTCGTTGGATTAGTTGGTCTGTGTGTAGG
TAGTTTTTTAAATGTTGTTATCTTGCGCACACCAAAAATGATGGAACAAGAGTGGAAAGTAGAGTGTCAATCATTACTAC
ACCCCGATCAACCTATCATTGACCATGAGAAATTGACACTCAACCACCCAGCCTCAACGTGTCCTCAATGTCATATGGGT
ATACGATGGTTCCATAATATTCCTCTCATTAGTTGGTTAGTTTTAAGAGGAAAATGTGCATCATGCAAACATCCCATTAG
CATCAGATACCCTTTTATCGAAGTACTTACGGCGGTTACCTCTATAACAATTGCGATTGTATTTGGTGCCTCTGTACAAA
TGCTATTTGGTCTTGTATTTACATGGATTTTAATTACTTTAACTTTTATAGATTTTGATACTCAGCTACTCCCCGATCGA
TTTACTTTTTCTTTAATTGGTCTAGGGCTTGCTGCAAATAGTTACAGCATATTCACTACTCCAACAACAGCAATTTGGGG
TACTCTCATTGGCTTCTTATGTTTATGGGTTGTTTATATTCTCTATAAACTCATTACAGGCAAAGAAGGCATGGGTTACG
GCGACTTTAAACTTCTTGCAGCTTTAGGCGCATGGATGGGGCCAATGATGCTGCCGTTGATTATTTTACTATCTTCTGTG
GTCGGTGTAATTATTGGACTCGTTGTCATTAAAGTCAAAAAGAATCAAGCATTTGCATTTGGGCCTTATATTGCAATCGC
AGGTTGGATTGCTTTTATATGGGGATCTAAAATTATGGCAATATATTTAGGTCAATAG

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (138-247)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-127)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	69.825	100	0.698
pilD	Acinetobacter baumannii D1279779	69.474	100	0.695
pilD	Vibrio cholerae strain A1552	54.255	98.947	0.537
pilD	Vibrio campbellii strain DS40M4	52.837	98.947	0.523
pilD	Neisseria gonorrhoeae MS11	49.416	90.175	0.446