Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | OXA88_RS04090 | Genome accession | NZ_CP113436 |
| Coordinates | 920759..921076 (+) | Length | 105 a.a. |
| NCBI ID | WP_011945930.1 | Uniprot ID | A0A378KB58 |
| Organism | Legionella pneumophila strain PATHC021 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 915759..926076
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OXA88_RS04070 (OXA88_04070) | - | 915911..917350 (+) | 1440 | WP_010946542.1 | cation:proton antiporter | - |
| OXA88_RS04075 (OXA88_04075) | nadC | 917347..918189 (+) | 843 | WP_013101201.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| OXA88_RS04080 (OXA88_04080) | - | 918186..919277 (+) | 1092 | WP_013101202.1 | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | - |
| OXA88_RS04085 (OXA88_04085) | - | 919252..920667 (+) | 1416 | WP_010946545.1 | M20 family metallopeptidase | - |
| OXA88_RS04090 (OXA88_04090) | comEA | 920759..921076 (+) | 318 | WP_011945930.1 | ComEA family DNA-binding protein | Machinery gene |
| OXA88_RS04095 (OXA88_04095) | - | 921272..922309 (+) | 1038 | WP_011213320.1 | rod shape-determining protein | - |
| OXA88_RS04100 (OXA88_04100) | mreC | 922287..923195 (+) | 909 | WP_010946548.1 | rod shape-determining protein MreC | - |
| OXA88_RS04105 (OXA88_04105) | mreD | 923192..923671 (+) | 480 | WP_010946549.1 | rod shape-determining protein MreD | - |
| OXA88_RS04110 (OXA88_04110) | - | 923607..924209 (-) | 603 | WP_011213321.1 | pseudouridine synthase | - |
| OXA88_RS04115 (OXA88_04115) | - | 924470..925168 (+) | 699 | WP_010946551.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11747.74 Da Isoelectric Point: 10.6194
>NTDB_id=762100 OXA88_RS04090 WP_011945930.1 920759..921076(+) (comEA) [Legionella pneumophila strain PATHC021]
MKARLIAILLSFIVIPFSSQAENEPQKTPAKQVLVKGKINLNTADVHSLTGSFKGIGKKRAEAIIAYRENHQGFKSLEEL
AEVKGIGQRFVDKNREKLKEIFVIN
MKARLIAILLSFIVIPFSSQAENEPQKTPAKQVLVKGKINLNTADVHSLTGSFKGIGKKRAEAIIAYRENHQGFKSLEEL
AEVKGIGQRFVDKNREKLKEIFVIN
Nucleotide
Download Length: 318 bp
>NTDB_id=762100 OXA88_RS04090 WP_011945930.1 920759..921076(+) (comEA) [Legionella pneumophila strain PATHC021]
ATGAAAGCAAGACTCATTGCTATTTTGTTGTCATTTATTGTTATCCCTTTCTCTTCTCAAGCTGAGAACGAGCCTCAAAA
AACTCCAGCTAAACAAGTCCTTGTTAAGGGCAAGATTAATCTCAATACAGCGGATGTGCATTCTTTAACAGGCTCTTTTA
AAGGGATAGGAAAAAAACGGGCTGAAGCTATTATTGCTTATAGAGAGAATCATCAAGGCTTTAAATCTCTGGAAGAGCTT
GCGGAAGTCAAGGGTATAGGGCAGCGTTTTGTAGATAAAAATAGAGAAAAACTGAAAGAAATTTTCGTTATTAATTAA
ATGAAAGCAAGACTCATTGCTATTTTGTTGTCATTTATTGTTATCCCTTTCTCTTCTCAAGCTGAGAACGAGCCTCAAAA
AACTCCAGCTAAACAAGTCCTTGTTAAGGGCAAGATTAATCTCAATACAGCGGATGTGCATTCTTTAACAGGCTCTTTTA
AAGGGATAGGAAAAAAACGGGCTGAAGCTATTATTGCTTATAGAGAGAATCATCAAGGCTTTAAATCTCTGGAAGAGCTT
GCGGAAGTCAAGGGTATAGGGCAGCGTTTTGTAGATAAAAATAGAGAAAAACTGAAAGAAATTTTCGTTATTAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Legionella pneumophila str. Paris |
99.048 |
100 |
0.99 |
| comEA | Legionella pneumophila strain ERS1305867 |
99.048 |
100 |
0.99 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
35.455 |
100 |
0.371 |
| comEA | Staphylococcus aureus N315 |
38.384 |
94.286 |
0.362 |
| comEA | Staphylococcus aureus MW2 |
38.384 |
94.286 |
0.362 |