Detailed information
Bioinformatically predicted
Overview
| Name | codY | Type | Regulator |
| Locus tag | OU819_RS18870 | Genome accession | NZ_CP113428 |
| Coordinates | 3648231..3649010 (-) | Length | 259 a.a. |
| NCBI ID | WP_000421288.1 | Uniprot ID | Q81WK7 |
| Organism | Bacillus cereus strain NW6 | ||
| Function | repression of comK (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 3613907..3687834 | 3648231..3649010 | within | 0 |
Gene organization within MGE regions
Location: 3613907..3687834
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OU819_RS18720 (OU819_18720) | - | 3614250..3615920 (-) | 1671 | WP_000823085.1 | ribonuclease J | - |
| OU819_RS18725 (OU819_18725) | dapA | 3616687..3617565 (-) | 879 | WP_000564761.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| OU819_RS18730 (OU819_18730) | dapG | 3617577..3618809 (-) | 1233 | WP_000692470.1 | aspartate kinase | - |
| OU819_RS18735 (OU819_18735) | asd | 3618833..3619879 (-) | 1047 | WP_070171799.1 | aspartate-semialdehyde dehydrogenase | - |
| OU819_RS18740 (OU819_18740) | dpaB | 3620030..3620629 (-) | 600 | WP_001049480.1 | dipicolinate synthase subunit B | - |
| OU819_RS18745 (OU819_18745) | dpaA | 3620626..3621528 (-) | 903 | WP_000954724.1 | dipicolinic acid synthetase subunit A | - |
| OU819_RS18750 (OU819_18750) | - | 3621803..3622054 (-) | 252 | WP_001239752.1 | YlmC/YmxH family sporulation protein | - |
| OU819_RS18755 (OU819_18755) | - | 3622181..3623422 (-) | 1242 | WP_000592993.1 | M16 family metallopeptidase | - |
| OU819_RS18760 (OU819_18760) | - | 3623509..3624408 (-) | 900 | WP_000647537.1 | polysaccharide deacetylase family protein | - |
| OU819_RS18765 (OU819_18765) | pnp | 3624560..3626698 (-) | 2139 | WP_000076750.1 | polyribonucleotide nucleotidyltransferase | - |
| OU819_RS18770 (OU819_18770) | rpsO | 3626859..3627128 (-) | 270 | WP_001229392.1 | 30S ribosomal protein S15 | - |
| OU819_RS18775 (OU819_18775) | ribF | 3627229..3628200 (-) | 972 | WP_000766711.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| OU819_RS18780 (OU819_18780) | truB | 3628244..3629167 (-) | 924 | WP_088015099.1 | tRNA pseudouridine(55) synthase TruB | - |
| OU819_RS18785 (OU819_18785) | rbfA | 3629254..3629610 (-) | 357 | WP_000776442.1 | 30S ribosome-binding factor RbfA | - |
| OU819_RS18790 (OU819_18790) | - | 3629626..3629907 (-) | 282 | WP_000582364.1 | DUF503 domain-containing protein | - |
| OU819_RS18795 (OU819_18795) | infB | 3629904..3631964 (-) | 2061 | WP_000036341.1 | translation initiation factor IF-2 | - |
| OU819_RS18800 (OU819_18800) | - | 3631969..3632280 (-) | 312 | WP_001286523.1 | YlxQ family RNA-binding protein | - |
| OU819_RS18805 (OU819_18805) | rnpM | 3632281..3632553 (-) | 273 | WP_000071128.1 | RNase P modulator RnpM | - |
| OU819_RS18810 (OU819_18810) | nusA | 3632565..3633671 (-) | 1107 | WP_000102609.1 | transcription termination factor NusA | - |
| OU819_RS18815 (OU819_18815) | rimP | 3633689..3634159 (-) | 471 | WP_000359097.1 | ribosome maturation factor RimP | - |
| OU819_RS18820 (OU819_18820) | - | 3634492..3638793 (-) | 4302 | WP_088015097.1 | PolC-type DNA polymerase III | - |
| OU819_RS18825 (OU819_18825) | - | 3638918..3640618 (-) | 1701 | WP_000814312.1 | proline--tRNA ligase | - |
| OU819_RS18830 (OU819_18830) | rseP | 3640728..3641984 (-) | 1257 | WP_001090229.1 | RIP metalloprotease RseP | - |
| OU819_RS18835 (OU819_18835) | dxr | 3642001..3643143 (-) | 1143 | WP_000790359.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| OU819_RS18840 (OU819_18840) | cdsA | 3643167..3643958 (-) | 792 | WP_000813583.1 | phosphatidate cytidylyltransferase | - |
| OU819_RS18845 (OU819_18845) | uppS | 3643976..3644752 (-) | 777 | WP_017561514.1 | isoprenyl transferase | - |
| OU819_RS18850 (OU819_18850) | frr | 3644838..3645395 (-) | 558 | WP_017561513.1 | ribosome recycling factor | - |
| OU819_RS18855 (OU819_18855) | pyrH | 3645398..3646120 (-) | 723 | WP_000042663.1 | UMP kinase | - |
| OU819_RS18860 (OU819_18860) | tsf | 3646187..3647074 (-) | 888 | WP_001018581.1 | translation elongation factor Ts | - |
| OU819_RS18865 (OU819_18865) | rpsB | 3647178..3647879 (-) | 702 | WP_000111483.1 | 30S ribosomal protein S2 | - |
| OU819_RS18870 (OU819_18870) | codY | 3648231..3649010 (-) | 780 | WP_000421288.1 | GTP-sensing pleiotropic transcriptional regulator CodY | Regulator |
| OU819_RS18875 (OU819_18875) | hslU | 3649088..3650479 (-) | 1392 | WP_000550088.1 | ATP-dependent protease ATPase subunit HslU | - |
| OU819_RS18880 (OU819_18880) | hslV | 3650502..3651044 (-) | 543 | WP_000526272.1 | ATP-dependent protease proteolytic subunit HslV | - |
| OU819_RS18885 (OU819_18885) | xerC | 3651087..3651986 (-) | 900 | WP_001101227.1 | tyrosine recombinase XerC | - |
| OU819_RS18890 (OU819_18890) | trmFO | 3652052..3653356 (-) | 1305 | WP_001991958.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| OU819_RS18895 (OU819_18895) | topA | 3653407..3655485 (-) | 2079 | WP_001286969.1 | type I DNA topoisomerase | - |
| OU819_RS18900 (OU819_18900) | dprA | 3655630..3656499 (-) | 870 | WP_070171414.1 | DNA-processing protein DprA | - |
| OU819_RS18905 (OU819_18905) | sucD | 3656587..3657489 (-) | 903 | WP_000115178.1 | succinate--CoA ligase subunit alpha | - |
| OU819_RS18910 (OU819_18910) | sucC | 3657510..3658670 (-) | 1161 | WP_001020785.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| OU819_RS18915 (OU819_18915) | rnhB | 3658864..3659637 (-) | 774 | WP_001174720.1 | ribonuclease HII | - |
| OU819_RS18920 (OU819_18920) | ylqF | 3659689..3660579 (-) | 891 | WP_000236696.1 | ribosome biogenesis GTPase YlqF | - |
| OU819_RS18925 (OU819_18925) | lepB | 3660600..3661151 (-) | 552 | WP_000711857.1 | signal peptidase I | - |
| OU819_RS18930 (OU819_18930) | rplS | 3661252..3661596 (-) | 345 | WP_001186516.1 | 50S ribosomal protein L19 | - |
| OU819_RS18935 (OU819_18935) | trmD | 3661743..3662477 (-) | 735 | WP_000686892.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| OU819_RS18940 (OU819_18940) | rimM | 3662477..3662992 (-) | 516 | WP_000170268.1 | ribosome maturation factor RimM | - |
| OU819_RS18945 (OU819_18945) | - | 3663113..3663340 (-) | 228 | WP_000737398.1 | KH domain-containing protein | - |
| OU819_RS18950 (OU819_18950) | rpsP | 3663355..3663627 (-) | 273 | WP_000268750.1 | 30S ribosomal protein S16 | - |
| OU819_RS18955 (OU819_18955) | ffh | 3663728..3665077 (-) | 1350 | WP_070172480.1 | signal recognition particle protein | - |
| OU819_RS18960 (OU819_18960) | - | 3665090..3665422 (-) | 333 | WP_000891062.1 | putative DNA-binding protein | - |
| OU819_RS18965 (OU819_18965) | ftsY | 3665557..3666546 (-) | 990 | WP_088015096.1 | signal recognition particle-docking protein FtsY | - |
| OU819_RS18970 (OU819_18970) | smc | 3666562..3670131 (-) | 3570 | WP_070172479.1 | chromosome segregation protein SMC | - |
| OU819_RS18975 (OU819_18975) | rncS | 3670278..3671015 (-) | 738 | WP_001146873.1 | ribonuclease III | - |
| OU819_RS18980 (OU819_18980) | acpP | 3671074..3671307 (-) | 234 | WP_000786062.1 | acyl carrier protein | - |
| OU819_RS18985 (OU819_18985) | fabG | 3671377..3672117 (-) | 741 | WP_000911782.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| OU819_RS18990 (OU819_18990) | fabD | 3672117..3673061 (-) | 945 | WP_000516948.1 | ACP S-malonyltransferase | - |
| OU819_RS18995 (OU819_18995) | plsX | 3673076..3674068 (-) | 993 | WP_000684110.1 | phosphate acyltransferase PlsX | - |
| OU819_RS19000 (OU819_19000) | fapR | 3674065..3674658 (-) | 594 | WP_000747352.1 | transcription factor FapR | - |
| OU819_RS19005 (OU819_19005) | recG | 3674747..3676795 (-) | 2049 | WP_001006884.1 | ATP-dependent DNA helicase RecG | - |
| OU819_RS19010 (OU819_19010) | - | 3677085..3678761 (-) | 1677 | WP_000027136.1 | DAK2 domain-containing protein | - |
| OU819_RS19015 (OU819_19015) | - | 3678784..3679146 (-) | 363 | WP_000021109.1 | Asp23/Gls24 family envelope stress response protein | - |
| OU819_RS19020 (OU819_19020) | rpmB | 3679525..3679713 (+) | 189 | WP_000124776.1 | 50S ribosomal protein L28 | - |
| OU819_RS19025 (OU819_19025) | spoVM | 3679787..3679867 (-) | 81 | WP_001213599.1 | stage V sporulation protein SpoVM | - |
| OU819_RS19030 (OU819_19030) | - | 3679934..3680614 (-) | 681 | WP_042515256.1 | thiamine diphosphokinase | - |
| OU819_RS19035 (OU819_19035) | rpe | 3680713..3681357 (-) | 645 | WP_000589966.1 | ribulose-phosphate 3-epimerase | - |
| OU819_RS19040 (OU819_19040) | rsgA | 3681360..3682241 (-) | 882 | WP_001113935.1 | ribosome small subunit-dependent GTPase A | - |
| OU819_RS19045 (OU819_19045) | prkC | 3682510..3684483 (-) | 1974 | WP_267998900.1 | serine/threonine protein kinase PrkC | - |
| OU819_RS19050 (OU819_19050) | - | 3684492..3685244 (-) | 753 | WP_000648699.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| OU819_RS19055 (OU819_19055) | rlmN | 3685249..3686337 (-) | 1089 | WP_000450543.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| OU819_RS19060 (OU819_19060) | rsmB | 3686342..3687676 (-) | 1335 | WP_001249680.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
Sequence
Protein
Download Length: 259 a.a. Molecular weight: 28774.05 Da Isoelectric Point: 4.7947
>NTDB_id=761910 OU819_RS18870 WP_000421288.1 3648231..3649010(-) (codY) [Bacillus cereus strain NW6]
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
Nucleotide
Download Length: 780 bp
>NTDB_id=761910 OU819_RS18870 WP_000421288.1 3648231..3649010(-) (codY) [Bacillus cereus strain NW6]
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| codY | Bacillus subtilis subsp. subtilis str. 168 |
81.081 |
100 |
0.811 |
| codY | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.667 |
98.456 |
0.459 |