Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QJ053_RS03715 Genome accession   NZ_CP124853
Coordinates   758890..759861 (+) Length   323 a.a.
NCBI ID   WP_000876318.1    Uniprot ID   A0A0H2XIG1
Organism   Staphylococcus aureus strain ED83     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 753890..764861
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QJ053_RS03695 (QJ053_03695) nrdI 754625..755023 (+) 399 WP_000692521.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  QJ053_RS03700 (QJ053_03700) nrdE 754986..757091 (+) 2106 WP_000855505.1 class 1b ribonucleoside-diphosphate reductase subunit alpha -
  QJ053_RS03705 (QJ053_03705) nrdF 757211..758182 (+) 972 WP_000562498.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
  QJ053_RS03710 (QJ053_03710) - 758696..758851 (+) 156 WP_000499195.1 hypothetical protein -
  QJ053_RS03715 (QJ053_03715) ceuB 758890..759861 (+) 972 WP_000876318.1 ABC transporter permease Machinery gene
  QJ053_RS03720 (QJ053_03720) - 759848..760804 (+) 957 WP_410530532.1 iron chelate uptake ABC transporter family permease subunit -
  QJ053_RS03725 (QJ053_03725) - 760801..761562 (+) 762 WP_410530533.1 ABC transporter ATP-binding protein -
  QJ053_RS03730 (QJ053_03730) - 761681..762709 (+) 1029 WP_410530534.1 ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD -
  QJ053_RS03735 (QJ053_03735) - 763026..763340 (-) 315 WP_001127269.1 CHY zinc finger protein -
  QJ053_RS03740 (QJ053_03740) murB 763358..764281 (-) 924 WP_000608444.1 UDP-N-acetylmuramate dehydrogenase -

Sequence

Protein


Download         Length: 323 a.a.        Molecular weight: 35582.13 Da        Isoelectric Point: 10.1194

>NTDB_id=761469 QJ053_RS03715 WP_000876318.1 758890..759861(+) (ceuB) [Staphylococcus aureus strain ED83]
MKYLLKGNILLLLLILLTIISLFIGVSELSIKDLLHLTESQRNILFSSRIPRTMSILIAGSSLALAGLIMQQMMQNKFVS
PTTAGTMEWAKLGILIALLFFPTGHILLKLVFAVICSICGTFLFVKIIDFIKVKDVIFVPLLGIMMGGIVASFTTFISLR
TNAVQSIGNWLNGNFAIITSGRYEILYLSIPLLALTYLFANHFTIVGMGKDFTNNLGLSYEKLINIALFITATITALVVV
TVGTLPFLGLVIPNIISIYRGDHLKNAIPHTMMLGAIFVLFSDIVGRIVVYPYEINIGLTIGVFGTIIFLILLMKGRKNY
AQQ

Nucleotide


Download         Length: 972 bp        

>NTDB_id=761469 QJ053_RS03715 WP_000876318.1 758890..759861(+) (ceuB) [Staphylococcus aureus strain ED83]
ATGAAGTATTTATTAAAGGGAAATATTTTGCTTCTATTACTAATATTGTTGACAATTATTTCGTTGTTCATAGGTGTGAG
TGAACTATCAATTAAAGATTTACTACATTTAACTGAGTCACAGCGGAATATTTTATTCTCAAGCCGAATACCGAGAACGA
TGAGTATTTTAATTGCTGGAAGTTCGTTGGCTTTAGCAGGCTTGATAATGCAACAAATGATGCAAAATAAGTTTGTTAGT
CCGACTACAGCTGGAACGATGGAATGGGCTAAACTAGGTATTTTAATTGCTTTATTGTTCTTTCCAACCGGTCATATTTT
ATTAAAACTAGTATTTGCTGTTATTTGCAGTATTTGCGGTACGTTTTTATTTGTTAAAATTATTGATTTTATCAAAGTGA
AAGATGTCATTTTTGTACCGCTTTTAGGAATTATGATGGGTGGGATTGTTGCAAGTTTCACAACCTTCATCTCATTGCGC
ACGAATGCTGTTCAAAGCATTGGTAACTGGCTTAACGGGAACTTTGCCATTATCACAAGTGGACGCTATGAAATTTTATA
TTTAAGTATTCCTCTTTTAGCATTGACATATCTTTTTGCAAATCATTTCACAATTGTAGGAATGGGTAAAGACTTTACTA
ATAATTTAGGTTTGAGTTATGAAAAATTAATTAACATCGCATTGTTTATTACTGCAACTATTACAGCATTGGTAGTGGTG
ACTGTTGGAACATTACCGTTCTTAGGACTAGTAATACCAAATATTATTTCAATTTATCGAGGTGATCATTTGAAAAATGC
TATCCCTCATACGATGATGTTAGGTGCCATCTTTGTATTGTTTTCTGATATAGTTGGCAGAATTGTTGTTTATCCATATG
AAATAAATATTGGTTTAACAATAGGTGTATTTGGAACAATCATTTTCCTTATCTTGCTTATGAAAGGTAGGAAAAATTAT
GCGCAACAATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(13-315)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XIG1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

47.5

99.071

0.471