Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   OS912_RS06405 Genome accession   NZ_CP113266
Coordinates   1257142..1257900 (+) Length   252 a.a.
NCBI ID   WP_000410380.1    Uniprot ID   A0A6G2D2R9
Organism   Streptococcus pneumoniae strain BC1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1252142..1262900
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS912_RS06375 (OS912_06380) comE 1252739..1253491 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  OS912_RS06380 (OS912_06385) comD/comD2 1253488..1254813 (-) 1326 WP_000364846.1 competence system sensor histidine kinase ComD Regulator
  OS912_RS06385 (OS912_06390) comC/comC2 1254834..1254959 (-) 126 WP_000799686.1 competence-stimulating peptide ComC Regulator
  OS912_RS06395 (OS912_06400) rlmH 1255241..1255720 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  OS912_RS06400 (OS912_06405) htrA 1255903..1257084 (+) 1182 WP_000681597.1 S1C family serine protease Regulator
  OS912_RS06405 (OS912_06410) spo0J 1257142..1257900 (+) 759 WP_000410380.1 ParB/RepB/Spo0J family partition protein Regulator
  OS912_RS06410 (OS912_06415) dnaA 1258113..1259474 (+) 1362 WP_000660615.1 chromosomal replication initiator protein DnaA -
  OS912_RS06415 (OS912_06420) dnaN 1259633..1260769 (+) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  OS912_RS06420 (OS912_06425) - 1260834..1261028 (+) 195 WP_000285194.1 DUF951 domain-containing protein -
  OS912_RS06425 (OS912_06430) ychF 1261112..1262227 (+) 1116 WP_001218707.1 redox-regulated ATPase YchF -
  OS912_RS06430 (OS912_06435) pth 1262298..1262867 (+) 570 WP_000163931.1 aminoacyl-tRNA hydrolase -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29179.54 Da        Isoelectric Point: 9.0305

>NTDB_id=761431 OS912_RS06405 WP_000410380.1 1257142..1257900(+) (spo0J) [Streptococcus pneumoniae strain BC1]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNYFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=761431 OS912_RS06405 WP_000410380.1 1257142..1257900(+) (spo0J) [Streptococcus pneumoniae strain BC1]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATTATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G2D2R9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508