Detailed information NTG0761355

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: OUY36_RS20480
• Genome accession: NZ_CP113258
• Coordinates: 4354823..4355968 (-)
• Length: 381 a.a.
• NCBI ID: WP_026006585.1
• Uniprot ID: A0AA47I1L4
• Organism: Stutzerimonas sp. R40042
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4349823..4360968

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OUY36_RS20455 (OUY36_20455)	-	4349899..4350915 (+)	1017	WP_017245430.1	aspartate carbamoyltransferase catalytic subunit	-
OUY36_RS20460 (OUY36_20460)	-	4350915..4352189 (+)	1275	WP_267935791.1	dihydroorotase	-
OUY36_RS20465 (OUY36_20465)	-	4352250..4352645 (-)	396	WP_017245432.1	TM2 domain-containing protein	-
OUY36_RS20470 (OUY36_20470)	-	4352778..4353992 (+)	1215	WP_063540689.1	putative DNA modification/repair radical SAM protein	-
OUY36_RS20475 (OUY36_20475)	-	4353992..4354816 (+)	825	WP_152481926.1	TIGR03915 family putative DNA repair protein	-
OUY36_RS20480 (OUY36_20480)	pilU	4354823..4355968 (-)	1146	WP_026006585.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
OUY36_RS20485 (OUY36_20485)	pilT	4356029..4357063 (-)	1035	WP_017245436.1	type IV pilus twitching motility protein PilT	Machinery gene
OUY36_RS20490 (OUY36_20490)	-	4357130..4357819 (+)	690	WP_267935792.1	YggS family pyridoxal phosphate-dependent enzyme	-
OUY36_RS20495 (OUY36_20495)	proC	4357830..4358654 (+)	825	WP_267935793.1	pyrroline-5-carboxylate reductase	-
OUY36_RS20500 (OUY36_20500)	-	4358664..4359254 (+)	591	WP_017245439.1	YggT family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 42540.84 Da
• Isoelectric Point: 6.8856

>NTDB_id=761355 OUY36_RS20480 WP_026006585.1 4354823..4355968(-) (pilU) [Stutzerimonas sp. R40042]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGKIMPVSKTAMSPEMTRETVHGVMNEQQRREFTENHECNFAISARGIGR
FRVSAFYQRNLAGMVLRRIETNIPTIEELKLPDVLKKLSMTKRGLVLFVGATGTGKSTSLASMIGYRNKNSSGHIISIED
PIEFIHQHQNCIVTQREVGIDTSSFEVALKNTLRQAPDVILIGEIRTRETMDYAVAFAETGHLCLATLHANNANQALDRI
INFFPPDRHNQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLINTPLAADLIRKGEVHELKSLMKRSTELGMQTFDQA
LYNLYVQGEITYEDALLHADSANDLRLLIKLGSETDGEHLTTVSQGLSLEVSDDDPGRRFR

Nucleotide

• Length: 1146 bp

>NTDB_id=761355 OUY36_RS20480 WP_026006585.1 4354823..4355968(-) (pilU) [Stutzerimonas sp. R40042]
ATGGAATTCGAGAAACTTCTGCGCCTGATGGTGGAAAAGGGCGGCTCCGATCTGTTCATCACGGCGGGCGTGCCGCCGTC
GATGAAGGTCAACGGCAAGATCATGCCGGTGAGCAAGACCGCCATGTCACCGGAGATGACCCGCGAAACCGTGCACGGCG
TGATGAACGAGCAGCAGCGTCGCGAGTTCACCGAAAATCACGAATGCAACTTCGCCATCAGTGCCCGCGGGATCGGTCGC
TTCCGTGTCAGTGCGTTCTATCAGCGAAACCTGGCCGGCATGGTGCTGCGTCGCATCGAGACCAACATTCCGACCATCGA
AGAGCTGAAGCTGCCTGACGTTCTCAAGAAGCTGTCGATGACCAAGCGTGGCCTGGTGCTGTTCGTCGGCGCCACCGGCA
CCGGCAAGTCGACCTCGCTGGCCTCGATGATCGGCTACCGCAACAAGAACTCCAGCGGCCACATCATCTCCATCGAAGAC
CCGATCGAATTCATCCACCAGCATCAGAACTGCATCGTTACCCAGCGCGAAGTCGGCATCGATACCAGCTCTTTCGAGGT
GGCACTGAAGAACACGCTGCGCCAGGCGCCGGACGTGATTCTCATCGGCGAGATTCGTACCCGCGAGACGATGGACTATG
CCGTAGCCTTCGCCGAAACCGGACACCTGTGTCTGGCCACGCTGCACGCCAACAACGCCAACCAGGCGCTGGACCGCATC
ATCAACTTCTTCCCGCCGGATCGGCACAACCAGGTCTGGATGGATCTGTCGCTCAACCTCAAGGCCATCGTCGCCCAGCA
GCTGGTGCCGACCCCGGACGGCAAGGGTCGTCGCGCGGTGATCGAGGTGTTGATCAACACCCCGCTGGCCGCGGACCTTA
TCCGCAAGGGCGAGGTGCATGAACTCAAGTCGCTGATGAAACGCTCCACCGAGCTGGGTATGCAGACCTTCGACCAGGCG
CTGTACAACCTCTATGTGCAGGGCGAGATCACCTATGAAGATGCGCTGTTGCACGCCGACTCGGCCAACGACCTGCGGCT
GTTGATCAAGCTGGGTTCGGAAACCGACGGCGAGCACCTGACCACTGTTTCGCAGGGGTTGAGTCTGGAGGTCAGCGACG
ACGATCCGGGTCGGCGCTTCCGTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (113-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	94.751	100	0.948
pilU	Acinetobacter baylyi ADP1	66.106	93.701	0.619
pilU	Vibrio cholerae strain A1552	59.714	91.864	0.549
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.658	88.976	0.388