Detailed information NTG0761353

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: OUY36_RS18575
• Genome accession: NZ_CP113258
• Coordinates: 3928008..3929345 (+)
• Length: 445 a.a.
• NCBI ID: WP_152481770.1
• Uniprot ID: -
• Organism: Stutzerimonas sp. R40042
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3923008..3934345

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OUY36_RS18550 (OUY36_18550)	pgeF	3923041..3923778 (-)	738	WP_267935505.1	peptidoglycan editing factor PgeF	-
OUY36_RS18555 (OUY36_18555)	rluD	3923775..3924749 (-)	975	WP_063541901.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
OUY36_RS18560 (OUY36_18560)	-	3924953..3925942 (+)	990	WP_063541899.1	outer membrane protein assembly factor BamD	-
OUY36_RS18565 (OUY36_18565)	-	3926063..3926296 (+)	234	WP_110775887.1	PP0621 family protein	-
OUY36_RS18570 (OUY36_18570)	pilS	3926286..3927881 (+)	1596	WP_267935507.1	ATP-binding protein	Regulator
OUY36_RS18575 (OUY36_18575)	pilR	3928008..3929345 (+)	1338	WP_152481770.1	sigma-54 dependent transcriptional regulator	Regulator
OUY36_RS18580 (OUY36_18580)	-	3929424..3930479 (-)	1056	WP_063541891.1	DUF2333 family protein	-
OUY36_RS18585 (OUY36_18585)	-	3930694..3932289 (+)	1596	WP_267935508.1	PleD family two-component system response regulator	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49568.95 Da
• Isoelectric Point: 6.2057

>NTDB_id=761353 OUY36_RS18575 WP_152481770.1 3928008..3929345(+) (pilR) [Stutzerimonas sp. R40042]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARECLAREHYDLCLTDMRLPDGSGLDLVQYIQQQHPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPAAESPVDNRLLGSSPPMKVLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRSDKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLADAM
LRRLAQECGDSSARLHPDALAKLENYRFPGNVRELENMLERAYTLCEDDEIKAGDLRLADSPGLSENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=761353 OUY36_RS18575 WP_152481770.1 3928008..3929345(+) (pilR) [Stutzerimonas sp. R40042]
ATGACCGCGCGCCAGAAAGCATTGATCATCGATGACGAGCCCGATATCCGCGAGTTGCTGGAGATCACCCTCGGGCGCAT
GAAGCTCGATACCCGCAGCGCCCGCAACCTCAAGGAAGCGCGCGAGTGCCTGGCACGCGAGCACTATGATCTGTGCCTGA
CCGACATGCGCCTGCCCGACGGCAGCGGCTTGGATCTGGTGCAGTACATCCAGCAGCAGCATCCACAACTGCCGGTGGCG
ATGATCACCGCCTATGGCAGTCTCGACACCGCCATTGGCGCCCTGAAGGCCGGCGCTTTCGATTTTTTGACCAAGCCTGT
GGACCTCAACCGCCTTCGCGAACTCGTCAGCACCGCCTTGCGACTGCGCGCACCGGCGGCCGAATCGCCAGTGGACAATC
GCCTGCTCGGCAGTTCGCCGCCGATGAAGGTCCTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGCCAGGCACCGGTCTAT
ATCAGCGGCGAATCGGGCAGCGGCAAGGAACTGGTGGCTCGCCTGATTCACGAACAGGGCCCACGCAGCGACAAGCCCTT
CGTGCCGGTCAACTGCGGCGCGATCCCTTCGGAACTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGGGCAGCTTCAGTG
GCGCCATCGAGGACAAACCCGGACTGTTCCAGGCGGCCAATGGCGGCACGCTGTTCCTCGACGAAGTGGCGGACCTGCCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCCATCCAGGAAAAGGCCGTACGCGCGGTCGGCGGTGCGCAGGAAGTGATGGT
CGACGTCCGCATCCTCTGTGCCACCCACAAGGATCTGGCCAGCGAAGTGGCCGCAGGCCGCTTCCGCCAGGACCTGTATT
ACCGCCTGAACGTCATCGAACTGCGTGTGCCGCCACTACGCGAGCGCCGTGAAGACATCGGCCTGCTCGCCGATGCCATG
CTGCGCCGGCTGGCACAGGAATGCGGCGACAGCAGTGCCCGGCTGCATCCTGATGCCCTGGCGAAGCTGGAAAACTATCG
TTTCCCGGGCAACGTGCGCGAACTGGAGAACATGCTCGAGCGGGCCTACACGCTCTGCGAAGACGACGAGATCAAGGCCG
GTGACCTCCGTCTAGCCGACAGCCCGGGCCTGTCGGAGAACGGCGAAGCCAGTCTGGCGCAGATCGATAACCTGGAAGAC
CACCTGGAAGAGATCGAGCGCAAGCTGATCATGCAGGCCCTTGAGGAGACCCGCTGGAACCGCACCGCGGCGGCCCAGCG
GCTTGGCCTGACCTTCCGCTCGATGCGCTACCGGCTGAAAAAGCTCGGCCTGGATTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

• Response regulator receiver domain (Response_reg) (8-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	86.261	99.775	0.861
pilR	Acinetobacter baumannii strain A118	50.327	100	0.519
luxO	Vibrio cholerae strain A1552	38.479	100	0.387