Detailed information NTG0761322

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: OSV15_RS20185
• Genome accession: NZ_CP113257
• Coordinates: 4165235..4166572 (+)
• Length: 445 a.a.
• NCBI ID: WP_267931234.1
• Uniprot ID: A0AA47HY94
• Organism: Stutzerimonas frequens strain TF18
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 4160235..4171572

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OSV15_RS20160 (OSV15_20160)	pgeF	4160267..4161004 (-)	738	WP_152481767.1	peptidoglycan editing factor PgeF	-
OSV15_RS20165 (OSV15_20165)	rluD	4161001..4161975 (-)	975	WP_063541901.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
OSV15_RS20170 (OSV15_20170)	-	4162179..4163168 (+)	990	WP_063541899.1	outer membrane protein assembly factor BamD	-
OSV15_RS20175 (OSV15_20175)	-	4163289..4163522 (+)	234	WP_110775887.1	PP0621 family protein	-
OSV15_RS20180 (OSV15_20180)	pilS	4163512..4165107 (+)	1596	WP_267931233.1	sensor histidine kinase	Regulator
OSV15_RS20185 (OSV15_20185)	pilR	4165235..4166572 (+)	1338	WP_267931234.1	sigma-54-dependent transcriptional regulator	Regulator
OSV15_RS20190 (OSV15_20190)	-	4166651..4167706 (-)	1056	WP_063541891.1	DUF2333 family protein	-
OSV15_RS20195 (OSV15_20195)	-	4167921..4169516 (+)	1596	WP_102838687.1	PleD family two-component system response regulator	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49554.93 Da
• Isoelectric Point: 6.2057

>NTDB_id=761322 OSV15_RS20185 WP_267931234.1 4165235..4166572(+) (pilR) [Stutzerimonas frequens strain TF18]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARECLAREHYDLCLTDMRLPDGSGLDLVQYIQQQHPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPAAESPVDNRLLGSSPPMKVLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRSDKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRVLCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLADAM
LRRLAQECGDSSARLHPDALAKLENYRFPGNVRELENMLERAYTLCEDDEIKAGDLRLADSPGLSENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=761322 OSV15_RS20185 WP_267931234.1 4165235..4166572(+) (pilR) [Stutzerimonas frequens strain TF18]
ATGACCGCGCGCCAGAAAGCACTGATCATCGATGACGAGCCCGATATCCGCGAGTTGCTGGAGATCACCCTCGGGCGGAT
GAAGCTCGATACCCGCAGCGCCCGCAACCTCAAGGAAGCGCGCGAGTGCCTGGCACGCGAGCACTATGATCTGTGCCTGA
CCGACATGCGCCTGCCCGACGGCAGCGGCTTGGACCTGGTGCAGTACATCCAGCAGCAGCATCCGCAACTGCCGGTGGCG
ATGATCACCGCCTATGGCAGTCTCGACACCGCCATCGGCGCCCTGAAGGCTGGCGCTTTCGATTTTCTGACCAAACCTGT
GGACCTCAACCGCCTTCGCGAACTCGTCAGCACCGCCTTGCGGCTGCGCGCACCGGCGGCCGAATCGCCAGTGGACAATC
GCCTGCTCGGTAGTTCGCCGCCGATGAAGGTCCTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGCCAGGCACCGGTCTAT
ATCAGCGGCGAATCGGGCAGCGGCAAGGAACTGGTGGCCCGCCTGATCCACGAACAGGGCCCACGCAGCGACAAGCCCTT
CGTGCCGGTCAACTGCGGCGCGATCCCTTCGGAACTGATGGAAAGCGAATTCTTCGGCCACAAGAAAGGCAGCTTCAGTG
GCGCCATCGAGGACAAACCCGGATTGTTCCAGGCGGCCAACGGCGGCACGCTGTTTCTCGACGAGGTGGCGGACCTGCCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCCATTCAGGAAAAGGCCGTACGCGCGGTCGGCGGTGCGCAGGAAGTGATGGT
CGACGTCCGCGTCCTCTGCGCCACCCACAAGGATCTGGCCAGCGAAGTGGCCGCAGGCCGCTTCCGCCAGGACCTGTATT
ACCGTCTGAACGTCATCGAACTGCGTGTGCCGCCACTACGCGAGCGCCGTGAAGACATCGGCCTGCTCGCCGATGCCATG
CTGCGCCGGCTGGCACAGGAATGCGGCGACAGCAGTGCCCGGCTGCATCCTGATGCCCTGGCGAAACTGGAAAACTATCG
TTTCCCGGGCAACGTGCGCGAACTGGAGAACATGCTCGAGCGGGCCTACACGCTCTGCGAAGACGACGAGATCAAGGCCG
GTGACCTGCGTCTAGCCGACAGCCCGGGCCTGTCGGAGAACGGCGAAGCCAGTCTGGCGCAGATCGATAACCTGGAAGAC
CACCTGGAAGAGATCGAGCGCAAGCTGATCATGCAGGCCCTTGAGGAAACCCGCTGGAACCGCACCGCGGCGGCCCAGCG
GCTTGGCCTGACTTTCCGCTCGATGCGCTACCGACTGAAAAAGCTTGGCCTGGATTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

• Response regulator receiver domain (Response_reg) (8-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	86.036	99.775	0.858
pilR	Acinetobacter baumannii strain A118	50.545	100	0.521
luxO	Vibrio cholerae strain A1552	38.479	100	0.387