Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | OTU47_RS03765 | Genome accession | NZ_CP113115 |
| Coordinates | 712867..713169 (+) | Length | 100 a.a. |
| NCBI ID | WP_000413382.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain NP2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 707867..718169
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OTU47_RS03720 (OTU47_03720) | - | 709493..709609 (+) | 117 | WP_001063632.1 | hypothetical protein | - |
| OTU47_RS03725 (OTU47_03725) | - | 709590..709793 (+) | 204 | WP_001091107.1 | hypothetical protein | - |
| OTU47_RS03730 (OTU47_03730) | - | 709796..710146 (+) | 351 | WP_054368148.1 | hypothetical protein | - |
| OTU47_RS03735 (OTU47_03735) | - | 710156..710455 (+) | 300 | WP_001811580.1 | hypothetical protein | - |
| OTU47_RS03740 (OTU47_03740) | - | 710459..710794 (+) | 336 | WP_001186204.1 | phage holin | - |
| OTU47_RS03745 (OTU47_03745) | lytA | 710794..711750 (+) | 957 | WP_054436120.1 | N-acetylmuramoyl-L-alanine amidase LytA | - |
| OTU47_RS03750 (OTU47_03750) | - | 711982..712239 (+) | 258 | WP_000698513.1 | hypothetical protein | - |
| OTU47_RS03755 (OTU47_03755) | comGC/cglC | 712241..712507 (+) | 267 | WP_050073122.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| OTU47_RS03760 (OTU47_03760) | comGD/cglD | 712500..712904 (+) | 405 | WP_000588013.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| OTU47_RS03765 (OTU47_03765) | comGE/cglE | 712867..713169 (+) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| OTU47_RS03770 (OTU47_03770) | comGF/cglF | 713132..713593 (+) | 462 | WP_000250542.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| OTU47_RS03775 (OTU47_03775) | comGG/cglG | 713571..713984 (+) | 414 | WP_000265624.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| OTU47_RS03780 (OTU47_03780) | - | 714121..714715 (+) | 595 | Protein_727 | class I SAM-dependent methyltransferase | - |
| OTU47_RS03785 (OTU47_03785) | comYH | 714776..715729 (+) | 954 | WP_000345101.1 | class I SAM-dependent methyltransferase | Machinery gene |
| OTU47_RS03790 (OTU47_03790) | - | 715780..716970 (+) | 1191 | WP_000167766.1 | acetate kinase | - |
| OTU47_RS03795 (OTU47_03795) | - | 716971..717102 (+) | 132 | WP_000768904.1 | hypothetical protein | - |
| OTU47_RS03800 (OTU47_03800) | rnpA | 717119..717490 (+) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11108.08 Da Isoelectric Point: 9.7273
>NTDB_id=760412 OTU47_RS03765 WP_000413382.1 712867..713169(+) (comGE/cglE) [Streptococcus pneumoniae strain NP2]
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
Nucleotide
Download Length: 303 bp
>NTDB_id=760412 OTU47_RS03765 WP_000413382.1 712867..713169(+) (comGE/cglE) [Streptococcus pneumoniae strain NP2]
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCCTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCCTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus mitis NCTC 12261 |
98 |
100 |
0.98 |
| comGE/cglE | Streptococcus mitis SK321 |
98 |
100 |
0.98 |
| comYE | Streptococcus mutans UA140 |
44.444 |
90 |
0.4 |
| comYE | Streptococcus mutans UA159 |
44.444 |
90 |
0.4 |