Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   OS091_RS07850 Genome accession   NZ_CP113037
Coordinates   1529856..1530542 (+) Length   228 a.a.
NCBI ID   WP_078055782.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Zilean     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1524856..1535542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS091_RS07815 yqeH 1525383..1526483 (+) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -
  OS091_RS07820 aroE 1526497..1527303 (+) 807 WP_000666767.1 shikimate dehydrogenase -
  OS091_RS07825 yhbY 1527307..1527597 (+) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  OS091_RS07830 nadD 1527600..1528169 (+) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  OS091_RS07835 yqeK 1528159..1528743 (+) 585 WP_001017838.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  OS091_RS07840 rsfS 1528744..1529097 (+) 354 WP_001088020.1 ribosome silencing factor -
  OS091_RS07845 - 1529100..1529816 (+) 717 WP_000942456.1 class I SAM-dependent DNA methyltransferase -
  OS091_RS07850 comEA 1529856..1530542 (+) 687 WP_078055782.1 ComEA family DNA-binding protein Machinery gene
  OS091_RS07855 - 1530634..1531095 (+) 462 WP_000439693.1 ComE operon protein 2 -
  OS091_RS07860 comEC 1531100..1533301 (+) 2202 WP_000967504.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  OS091_RS07865 holA 1533358..1534332 (+) 975 WP_001282570.1 DNA polymerase III subunit delta -
  OS091_RS07870 rpsT 1534377..1534628 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25761.45 Da        Isoelectric Point: 9.6753

>NTDB_id=759326 OS091_RS07850 WP_078055782.1 1529856..1530542(+) (comEA) [Staphylococcus aureus strain Zilean]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=759326 OS091_RS07850 WP_078055782.1 1529856..1530542(+) (comEA) [Staphylococcus aureus strain Zilean]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCTAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTGCTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
GAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

98.678

99.561

0.982
  comEA Staphylococcus aureus N315

98.678

99.561

0.982