Detailed information NTG0075708

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: KI243_RS08615
• Genome accession: NZ_AP021904
• Coordinates: 1938347..1940575 (+)
• Length: 742 a.a.
• NCBI ID: WP_212810692.1
• Uniprot ID: -
• Organism: Pseudomonas sp. Ost2
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1933347..1945575

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KI243_RS08590 (PHLH7_16820)	-	1934433..1935092 (+)	660	WP_177085160.1	transglutaminase family protein	-
KI243_RS08595 (PHLH7_16830)	-	1935136..1935759 (+)	624	WP_212810690.1	glutathione S-transferase	-
KI243_RS08600 (PHLH7_16840)	-	1935893..1936825 (+)	933	WP_017126379.1	ABC transporter ATP-binding protein	-
KI243_RS08605 (PHLH7_16850)	-	1936822..1937601 (+)	780	WP_017126380.1	ABC transporter permease	-
KI243_RS08610 (PHLH7_16860)	-	1937687..1938208 (-)	522	WP_212810691.1	DUF2062 domain-containing protein	-
KI243_RS08615 (PHLH7_16870)	comA	1938347..1940575 (+)	2229	WP_212810692.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
KI243_RS08620 (PHLH7_16880)	exbB	1940838..1941473 (+)	636	WP_017126384.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
KI243_RS08625 (PHLH7_16890)	-	1941470..1941898 (+)	429	WP_017126385.1	biopolymer transporter ExbD	-
KI243_RS08630 (PHLH7_16900)	lpxK	1941898..1942908 (+)	1011	WP_177119669.1	tetraacyldisaccharide 4'-kinase	-
KI243_RS08635 (PHLH7_16910)	-	1942935..1943120 (+)	186	WP_010447200.1	Trm112 family protein	-
KI243_RS08640 (PHLH7_16920)	kdsB	1943117..1943881 (+)	765	WP_177085152.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
KI243_RS08645 (PHLH7_16930)	-	1943881..1944345 (+)	465	WP_212810693.1	low molecular weight protein-tyrosine-phosphatase	-
KI243_RS08650 (PHLH7_16940)	murB	1944342..1945361 (+)	1020	WP_212810694.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 742 a.a.
• Molecular weight: 80693.83 Da
• Isoelectric Point: 10.8105

>NTDB_id=75708 KI243_RS08615 WP_212810692.1 1938347..1940575(+) (comA) [Pseudomonas sp. Ost2]
MRTGMLALAAGLLALRFLPQLPPVGMLAVLSLVGLMLLPFRSYPVALFLFGFSWACLQAHWALADRLALALDGQTLWLEG
RVVGLPQPGDAVQRFELADATARRGVLPRRIRLAWYGGPPVGSGERWRLAVKLKSPRGLLNPHGFDREAWLLAQRIGATG
TVKDGQLLAPSTGSWRDAIRQRMLQVEARGQAATLVALVLGDGSGLSAETWRILQDTGTVHLLVISGQHIGLFAALVYGL
IAGLARYGLWPQRRPWLPWACGLAFVAALGYGLLAGFGVPVQRACAMIGLVLLWRLRFRHLGATWPLLLALNLVLLFEPL
ASLRPGFWLSFAAVAVLVFTFSRRLGAWGIWQTWTRAQWTIALGLVPFLLVLGLPVSLSGPWVNLIAVPWISLMVLPLAL
LGTLLLPLPWVGEALLWLAGGLLELLFLGLAQVALRIPAWLPEAIPPWAWLLGSLGILLLLLPAGVPLRPLGWPLAALMV
LAPPSRMPEGQAEVWQLDVGQGLAILVRTRHHNLLYDAGPRFGDFDLGQRVVLPSLRKLGVRALDLMLISHADADHAGGA
LAVRNGLPVGRVLSGDAAGLPAQLFAESCVSGERWEWDGVSFALWQWPDATDSNQRSCVLQIEASGERLLLTGDIDIQAE
QAFLQSPLAVAGDWLQAPHHGSRSSSSMAFLQRLAPRAVLISRGHGNAFGHPHPQVMARYQALGMQVHDSAEQGAVRLQL
GAFGAARSQREQRRFWRWAAED

Nucleotide

• Length: 2229 bp

>NTDB_id=75708 KI243_RS08615 WP_212810692.1 1938347..1940575(+) (comA) [Pseudomonas sp. Ost2]
ATGCGCACAGGGATGCTGGCGCTGGCGGCTGGATTGCTGGCCTTGCGGTTTTTGCCGCAGTTGCCGCCTGTCGGAATGCT
GGCGGTGCTGTCGCTGGTCGGCCTGATGCTGTTGCCGTTTCGCAGCTATCCCGTTGCCTTGTTCCTGTTCGGTTTCAGTT
GGGCCTGCCTGCAGGCGCACTGGGCCCTGGCTGATCGCCTGGCGCTGGCCCTCGACGGCCAGACGCTGTGGCTCGAAGGG
CGAGTGGTCGGCTTGCCGCAACCGGGCGATGCCGTGCAGCGCTTTGAGCTGGCGGACGCGACGGCGCGGCGAGGCGTGCT
GCCGCGGCGGATCCGCCTGGCCTGGTATGGCGGGCCACCGGTCGGCAGTGGCGAACGCTGGCGGCTGGCGGTCAAGCTCA
AGTCGCCGCGGGGGCTGCTCAATCCCCATGGTTTCGATCGTGAGGCCTGGCTGCTGGCGCAACGGATCGGCGCCACGGGG
ACGGTCAAGGACGGGCAATTGCTGGCGCCCTCCACGGGTTCCTGGCGCGATGCGATTCGCCAGCGGATGCTGCAGGTCGA
GGCCCGGGGCCAGGCGGCGACCCTGGTGGCATTGGTCCTGGGGGATGGCTCGGGACTGTCGGCCGAGACCTGGCGCATCC
TGCAGGACACCGGGACCGTCCATCTGCTGGTGATTTCCGGACAGCATATCGGGCTCTTCGCCGCCCTGGTCTATGGGTTG
ATTGCCGGGCTGGCGCGTTATGGCCTGTGGCCGCAGCGCCGGCCCTGGCTGCCATGGGCCTGTGGCCTGGCCTTCGTGGC
CGCGTTGGGCTACGGCCTGCTGGCGGGGTTCGGCGTTCCGGTGCAGCGGGCCTGCGCGATGATCGGCCTGGTGCTGCTGT
GGCGCCTGCGTTTTCGCCACCTGGGGGCTACCTGGCCGCTGCTGCTGGCGCTGAACCTGGTCCTGCTGTTCGAGCCGCTG
GCGAGCCTGCGACCGGGGTTCTGGCTGTCCTTTGCCGCCGTGGCGGTGCTGGTCTTCACCTTCAGCCGGCGTCTCGGTGC
CTGGGGGATCTGGCAGACCTGGACCCGCGCGCAATGGACCATCGCCCTCGGGCTGGTGCCGTTCCTGCTGGTCTTGGGCC
TGCCCGTCAGCCTCAGTGGACCATGGGTCAACCTGATCGCGGTGCCTTGGATCAGCCTCATGGTGTTGCCGCTGGCCTTG
CTCGGCACCTTGCTGCTGCCACTGCCCTGGGTGGGTGAAGCATTGCTGTGGCTGGCCGGCGGCTTGCTGGAACTGCTGTT
CCTCGGGCTTGCCCAGGTGGCGCTGCGGATTCCGGCCTGGTTGCCGGAGGCCATCCCGCCGTGGGCCTGGTTGCTGGGCA
GCCTGGGCATCCTGCTGCTGTTGCTGCCCGCGGGGGTGCCGCTGCGGCCCCTGGGCTGGCCACTGGCGGCACTGATGGTG
CTGGCACCGCCCTCCCGGATGCCAGAAGGCCAGGCCGAGGTCTGGCAACTGGATGTCGGACAGGGACTGGCGATCCTGGT
GCGTACCCGGCACCACAACCTGCTGTATGACGCGGGGCCACGCTTTGGCGATTTCGACCTGGGCCAGCGCGTGGTGCTGC
CGTCCTTGCGCAAGCTGGGCGTGCGGGCGCTCGACCTGATGCTGATCAGCCACGCCGATGCCGACCATGCCGGCGGGGCC
CTGGCGGTGCGCAACGGCTTGCCGGTGGGCCGGGTGCTCAGCGGTGACGCCGCGGGCCTGCCGGCGCAGTTGTTCGCCGA
GTCCTGTGTCAGCGGCGAACGCTGGGAATGGGACGGCGTGAGCTTTGCCCTGTGGCAATGGCCGGATGCCACGGACAGCA
ACCAGCGTTCCTGTGTCCTGCAGATCGAGGCGAGTGGCGAGCGGTTGCTGCTCACCGGCGATATCGATATCCAGGCCGAA
CAGGCGTTCCTGCAGAGTCCGCTGGCCGTCGCCGGCGACTGGCTGCAGGCGCCCCATCACGGCAGTCGCAGTTCGTCCTC
GATGGCTTTCCTTCAGCGGTTGGCGCCCCGGGCCGTGCTGATTTCGCGGGGGCATGGCAATGCCTTCGGCCATCCGCACC
CGCAGGTCATGGCGCGCTACCAGGCCCTGGGCATGCAGGTCCATGACAGCGCGGAGCAGGGCGCCGTGCGCCTGCAACTG
GGAGCCTTCGGCGCCGCCCGGTCGCAGCGTGAGCAGAGGCGCTTCTGGCGCTGGGCTGCGGAGGATTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-685)

• Competence protein (Competence) (198-463)

• Domain of unknown function (DUF4131) (DUF4131) (21-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	63.231	96.765	0.612
comA	Ralstonia pseudosolanacearum GMI1000	35.571	100	0.407