Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ONR68_RS17085 | Genome accession | NZ_CP110376 |
| Coordinates | 3639721..3640245 (+) | Length | 174 a.a. |
| NCBI ID | WP_004249162.1 | Uniprot ID | A0A1Z1SRL1 |
| Organism | Proteus mirabilis strain NYP69 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 3590079..3641921 | 3639721..3640245 | within | 0 |
Gene organization within MGE regions
Location: 3590079..3641921
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ONR68_RS16820 (ONR68_16820) | - | 3590079..3591725 (-) | 1647 | WP_206092375.1 | hypothetical protein | - |
| ONR68_RS16825 (ONR68_16825) | - | 3591712..3592272 (-) | 561 | WP_143475709.1 | hypothetical protein | - |
| ONR68_RS16830 (ONR68_16830) | - | 3592283..3593023 (-) | 741 | WP_265062959.1 | hypothetical protein | - |
| ONR68_RS16835 (ONR68_16835) | - | 3593002..3593424 (-) | 423 | WP_049212315.1 | tail fiber assembly protein | - |
| ONR68_RS16840 (ONR68_16840) | - | 3593426..3595354 (-) | 1929 | WP_206092371.1 | phage tail protein | - |
| ONR68_RS16845 (ONR68_16845) | - | 3595358..3595915 (-) | 558 | WP_049212312.1 | phage tail protein | - |
| ONR68_RS16850 (ONR68_16850) | - | 3595908..3597092 (-) | 1185 | WP_071233396.1 | baseplate J/gp47 family protein | - |
| ONR68_RS16855 (ONR68_16855) | - | 3597082..3597417 (-) | 336 | WP_049219617.1 | DUF2590 family protein | - |
| ONR68_RS16860 (ONR68_16860) | - | 3597428..3599947 (-) | 2520 | WP_265062960.1 | phage tail tape measure protein | - |
| ONR68_RS16865 (ONR68_16865) | - | 3599944..3600087 (-) | 144 | WP_162837603.1 | DUF6890 family protein | - |
| ONR68_RS16870 (ONR68_16870) | - | 3600132..3600401 (-) | 270 | WP_036907284.1 | putative phage tail assembly chaperone | - |
| ONR68_RS16880 (ONR68_16880) | - | 3600510..3600884 (-) | 375 | WP_071233398.1 | hypothetical protein | - |
| ONR68_RS16885 (ONR68_16885) | - | 3600881..3601306 (-) | 426 | WP_071233399.1 | structural protein | - |
| ONR68_RS16890 (ONR68_16890) | - | 3601303..3601596 (-) | 294 | WP_036907276.1 | phage holin family protein | - |
| ONR68_RS16895 (ONR68_16895) | - | 3601611..3602063 (-) | 453 | WP_036907273.1 | DUF2597 family protein | - |
| ONR68_RS16900 (ONR68_16900) | - | 3602063..3603181 (-) | 1119 | WP_109407769.1 | DUF2586 domain-containing protein | - |
| ONR68_RS16905 (ONR68_16905) | - | 3603196..3603894 (-) | 699 | WP_206092365.1 | hypothetical protein | - |
| ONR68_RS16910 (ONR68_16910) | - | 3603891..3604367 (-) | 477 | WP_071233402.1 | phage tail protein | - |
| ONR68_RS16915 (ONR68_16915) | - | 3604364..3604816 (-) | 453 | WP_036907264.1 | head completion/stabilization protein | - |
| ONR68_RS16920 (ONR68_16920) | - | 3604836..3605042 (-) | 207 | WP_036907261.1 | hypothetical protein | - |
| ONR68_RS16925 (ONR68_16925) | gpM | 3605151..3605855 (-) | 705 | WP_049212293.1 | phage terminase small subunit | - |
| ONR68_RS16930 (ONR68_16930) | - | 3605861..3606892 (-) | 1032 | WP_036907256.1 | phage major capsid protein, P2 family | - |
| ONR68_RS16935 (ONR68_16935) | - | 3606903..3607739 (-) | 837 | WP_071233403.1 | GPO family capsid scaffolding protein | - |
| ONR68_RS16940 (ONR68_16940) | - | 3607901..3609688 (+) | 1788 | WP_265028236.1 | terminase large subunit domain-containing protein | - |
| ONR68_RS16945 (ONR68_16945) | - | 3609688..3610722 (+) | 1035 | WP_196538722.1 | phage portal protein | - |
| ONR68_RS16950 (ONR68_16950) | - | 3610719..3611027 (+) | 309 | WP_036907246.1 | ogr/Delta-like zinc finger family protein | - |
| ONR68_RS16955 (ONR68_16955) | - | 3611029..3611211 (-) | 183 | WP_049220744.1 | hypothetical protein | - |
| ONR68_RS16960 (ONR68_16960) | - | 3611530..3613722 (-) | 2193 | WP_206092361.1 | replication endonuclease | - |
| ONR68_RS16965 (ONR68_16965) | - | 3613724..3613975 (-) | 252 | WP_036907235.1 | DUF2732 family protein | - |
| ONR68_RS16970 (ONR68_16970) | - | 3614052..3614399 (-) | 348 | WP_088206999.1 | DUF5347 domain-containing protein | - |
| ONR68_RS16975 (ONR68_16975) | - | 3614564..3615073 (-) | 510 | WP_088206998.1 | phage regulatory CII family protein | - |
| ONR68_RS16980 (ONR68_16980) | - | 3615103..3615327 (-) | 225 | WP_036907225.1 | AlpA family transcriptional regulator | - |
| ONR68_RS16985 (ONR68_16985) | - | 3615477..3616067 (+) | 591 | WP_052124619.1 | phage repressor protein CI | - |
| ONR68_RS16990 (ONR68_16990) | - | 3616082..3616504 (+) | 423 | WP_036907222.1 | hypothetical protein | - |
| ONR68_RS16995 (ONR68_16995) | - | 3616509..3617540 (+) | 1032 | WP_088206997.1 | tyrosine-type recombinase/integrase | - |
| ONR68_RS17000 (ONR68_17000) | - | 3617694..3619010 (+) | 1317 | WP_237612703.1 | fimbria/pilus outer membrane usher protein | - |
| ONR68_RS17005 (ONR68_17005) | - | 3619010..3619528 (+) | 519 | WP_036895723.1 | fimbrial protein | - |
| ONR68_RS17010 (ONR68_17010) | - | 3619528..3620601 (+) | 1074 | WP_004250113.1 | fimbrial protein | - |
| ONR68_RS17015 (ONR68_17015) | - | 3620628..3620945 (+) | 318 | WP_004245886.1 | helix-turn-helix domain-containing protein | - |
| ONR68_RS17020 (ONR68_17020) | potD | 3621078..3622121 (-) | 1044 | WP_265028237.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| ONR68_RS17025 (ONR68_17025) | potC | 3622238..3623017 (-) | 780 | WP_004245888.1 | spermidine/putrescine ABC transporter permease PotC | - |
| ONR68_RS17030 (ONR68_17030) | potB | 3623014..3623874 (-) | 861 | WP_004250112.1 | spermidine/putrescine ABC transporter permease PotB | - |
| ONR68_RS17035 (ONR68_17035) | potA | 3623858..3624973 (-) | 1116 | WP_004245891.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
| ONR68_RS17040 (ONR68_17040) | - | 3625417..3626691 (-) | 1275 | WP_004249170.1 | S8 family peptidase | - |
| ONR68_RS17045 (ONR68_17045) | dusA | 3627035..3628069 (+) | 1035 | WP_004249169.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| ONR68_RS17050 (ONR68_17050) | - | 3628176..3629159 (-) | 984 | WP_004245895.1 | NADPH:quinone reductase | - |
| ONR68_RS17055 (ONR68_17055) | dnaB | 3629327..3630736 (+) | 1410 | WP_004245896.1 | replicative DNA helicase | - |
| ONR68_RS17060 (ONR68_17060) | alr | 3630777..3631868 (+) | 1092 | WP_049219006.1 | alanine racemase | - |
| ONR68_RS17065 (ONR68_17065) | - | 3631924..3633117 (+) | 1194 | WP_012368490.1 | amino acid aminotransferase | - |
| ONR68_RS17070 (ONR68_17070) | - | 3633239..3634588 (-) | 1350 | WP_135092098.1 | serine dehydratase subunit alpha family protein | - |
| ONR68_RS17075 (ONR68_17075) | - | 3634650..3635981 (-) | 1332 | WP_020946334.1 | amino acid permease | - |
| ONR68_RS17080 (ONR68_17080) | uvrA | 3636634..3639468 (-) | 2835 | WP_004249165.1 | excinuclease ABC subunit UvrA | - |
| ONR68_RS17085 (ONR68_17085) | ssb | 3639721..3640245 (+) | 525 | WP_004249162.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| ONR68_RS17090 (ONR68_17090) | zur | 3640587..3641117 (+) | 531 | WP_049257468.1 | zinc uptake transcriptional repressor Zur | - |
| ONR68_RS17095 (ONR68_17095) | lexA | 3641310..3641921 (-) | 612 | WP_004245906.1 | transcriptional repressor LexA | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 18830.90 Da Isoelectric Point: 4.9468
>NTDB_id=754804 ONR68_RS17085 WP_004249162.1 3639721..3640245(+) (ssb) [Proteus mirabilis strain NYP69]
MASRGVNKVILIGNLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTEWHRVVIFGKLAEIAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYSTEVVVNIGGTMQMLGGRGGQDNAPSQGQGGWGQPQQPQASQQFSGGAPSRPAQQPAAAPAP
SNEPPMDFDDDIPF
MASRGVNKVILIGNLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTEWHRVVIFGKLAEIAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYSTEVVVNIGGTMQMLGGRGGQDNAPSQGQGGWGQPQQPQASQQFSGGAPSRPAQQPAAAPAP
SNEPPMDFDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=754804 ONR68_RS17085 WP_004249162.1 3639721..3640245(+) (ssb) [Proteus mirabilis strain NYP69]
ATGGCGAGCAGAGGCGTTAACAAAGTTATTCTTATCGGTAATTTAGGGCAGGATCCAGAAATCCGTTATATGCCAAGTGG
TGGTGCAGTGGCAAATCTGACACTAGCAACTTCAGAAAGCTGGCGCGACAAACAAACCGGTGAAATGAAAGAGAAAACCG
AATGGCACCGTGTGGTCATTTTCGGCAAACTAGCAGAAATTGCTGGCGAGTATCTGCGTAAAGGTTCACAAGTTTATATT
GAAGGTCAATTACAAACACGTAAATGGCAAGATCAAAGTGGTCAAGATCGCTACAGCACTGAAGTTGTGGTGAATATCGG
TGGCACAATGCAGATGTTAGGTGGCCGTGGTGGTCAAGATAATGCACCTTCACAAGGCCAAGGCGGTTGGGGTCAACCTC
AGCAACCACAAGCATCACAACAGTTTAGTGGTGGCGCACCATCTCGCCCAGCACAACAACCAGCAGCGGCACCAGCGCCA
AGTAATGAACCACCAATGGACTTTGATGACGATATTCCGTTCTGA
ATGGCGAGCAGAGGCGTTAACAAAGTTATTCTTATCGGTAATTTAGGGCAGGATCCAGAAATCCGTTATATGCCAAGTGG
TGGTGCAGTGGCAAATCTGACACTAGCAACTTCAGAAAGCTGGCGCGACAAACAAACCGGTGAAATGAAAGAGAAAACCG
AATGGCACCGTGTGGTCATTTTCGGCAAACTAGCAGAAATTGCTGGCGAGTATCTGCGTAAAGGTTCACAAGTTTATATT
GAAGGTCAATTACAAACACGTAAATGGCAAGATCAAAGTGGTCAAGATCGCTACAGCACTGAAGTTGTGGTGAATATCGG
TGGCACAATGCAGATGTTAGGTGGCCGTGGTGGTCAAGATAATGCACCTTCACAAGGCCAAGGCGGTTGGGGTCAACCTC
AGCAACCACAAGCATCACAACAGTTTAGTGGTGGCGCACCATCTCGCCCAGCACAACAACCAGCAGCGGCACCAGCGCCA
AGTAATGAACCACCAATGGACTTTGATGACGATATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
71.892 |
100 |
0.764 |
| ssb | Glaesserella parasuis strain SC1401 |
57.065 |
100 |
0.603 |
| ssb | Neisseria meningitidis MC58 |
48.023 |
100 |
0.489 |
| ssb | Neisseria gonorrhoeae MS11 |
48.023 |
100 |
0.489 |