Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   UKS_RS08535 Genome accession   NZ_AP021887
Coordinates   1702233..1702865 (-) Length   210 a.a.
NCBI ID   WP_232049741.1    Uniprot ID   A0A6H3S7C3
Organism   Streptococcus sp. 116-D4     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1697233..1707865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UKS_RS08510 (UKS_16470) recA 1697391..1698557 (-) 1167 WP_156012726.1 recombinase RecA Machinery gene
  UKS_RS08515 (UKS_16480) cinA 1698612..1699868 (-) 1257 WP_156012728.1 competence/damage-inducible protein A Machinery gene
  UKS_RS08520 (UKS_16490) - 1699957..1701009 (-) 1053 WP_156012730.1 LCP family protein -
  UKS_RS08525 (UKS_16500) - 1701017..1701535 (-) 519 WP_049496202.1 GNAT family N-acetyltransferase -
  UKS_RS08530 (UKS_16510) tsaE 1701525..1701968 (-) 444 WP_156012732.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  UKS_RS08535 (UKS_16520) comM 1702233..1702865 (-) 633 WP_232049741.1 competence protein Regulator
  UKS_RS08540 (UKS_16530) ndk 1702996..1703418 (-) 423 WP_049496208.1 nucleoside-diphosphate kinase -

Sequence

Protein


Download         Length: 210 a.a.        Molecular weight: 24035.21 Da        Isoelectric Point: 9.2987

>NTDB_id=75382 UKS_RS08535 WP_232049741.1 1702233..1702865(-) (comM) [Streptococcus sp. 116-D4]
MMEKMKKQIRVLLLLTVFGLSSCSCLSLSTWALMLNQNCFYYLVGMLLLASIGAGLNYYSGQRNQSYSVFKEEKQQFLYS
LLLLVNILGLALIVIEHILAGNTSVEGGVEVFLPSFFFLFGIDLLVFLPIQKYVNGVKKFLGKKEMCFISGLAILIFLRN
PWMLLSMTFYITLGMLFLGLLVPKVIRWEVSFYSHLMRDILLVVFLLFLF

Nucleotide


Download         Length: 633 bp        

>NTDB_id=75382 UKS_RS08535 WP_232049741.1 1702233..1702865(-) (comM) [Streptococcus sp. 116-D4]
ATGATGGAAAAAATGAAAAAGCAAATTCGTGTTTTGTTATTACTGACAGTTTTTGGTCTTAGTAGCTGTTCTTGTTTAAG
TTTATCGACTTGGGCCTTGATGTTAAATCAAAACTGCTTCTATTATTTAGTTGGCATGTTGCTCCTTGCCAGTATTGGTG
CAGGACTAAACTACTATAGTGGACAGCGAAATCAATCTTATTCAGTTTTTAAGGAAGAAAAGCAACAATTCTTGTATAGT
CTGTTGCTCCTAGTAAATATTTTGGGTTTAGCTTTAATTGTTATAGAACATATCCTTGCAGGAAATACATCCGTAGAAGG
AGGTGTGGAAGTCTTTCTACCGAGCTTCTTTTTCTTATTTGGTATTGATTTGTTAGTTTTTCTGCCGATTCAGAAGTATG
TAAATGGAGTGAAAAAGTTTTTAGGTAAGAAAGAGATGTGTTTTATTAGTGGACTAGCTATTCTAATCTTTCTCAGAAAT
CCTTGGATGCTATTATCCATGACCTTTTATATCACCTTGGGAATGCTATTTCTAGGACTGTTGGTACCAAAAGTCATTCG
CTGGGAAGTTTCGTTTTATAGCCATTTGATGAGAGATATCTTATTAGTTGTCTTCTTACTGTTTCTATTCTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H3S7C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus mitis NCTC 12261

96.19

100

0.962
  comM Streptococcus mitis SK321

92.965

94.762

0.881
  comM Streptococcus pneumoniae D39

39.024

97.619

0.381
  comM Streptococcus pneumoniae R6

39.024

97.619

0.381
  comM Streptococcus pneumoniae TIGR4

39.024

97.619

0.381

Multiple sequence alignment